BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10849 (UTR included)
(1714 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1037_C1 1651 0.0
>BF14_1037_C1
Length = 1180
Score = 1651 bits (833), Expect = 0.0
Identities = 871/881 (98%), Gaps = 2/881 (0%)
Strand = Plus / Plus
Query: 659 gatcggtcagcggcacgacgggttcctggggatcctgcagcgagcgctggcgcgggcctc 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatcggtcagcggcacgacgggttcctggggatcctgcagcgagcgctggcgcgggcctc 360
Query: 719 gccgcacatatggttcgagaggtccgaggtcaaggacagacacgcagtcgccaggaggct 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gccgcacatatggttcgagaggtccgaggtcaaggacagacacgcagtcgccaggaggct 420
Query: 779 gaaggagcacatctctgtgccggacaacccgcccatcctgatcttccccgagggcacgtg 838
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 421 gaaggagcacatctctgtgccggacaacccgccgatcctgatcttccccgagggcacgtg 480
Query: 839 catcaacaacacgtccgtgatgcagtttaagaagggcagcttcgaggtcggcggcaccat 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 catcaacaacacgtccgtgatgcagtttaagaagggcagcttcgaggtcggcggcaccat 540
Query: 899 ctacccggtggccatcaagtacgacccccgcttcggcgacgcgttctggaactcgtcccg 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctacccggtggccatcaagtacgacccccgcttcggcgacgcgttctggaactcgtcccg 600
Query: 959 ctacggcatgcttcactacctgctgaacatgatgagctcgtgggcgatcgtgtgcgacgt 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctacggcatgcttcactacctgctgaacatgatgagctcgtgggcgatcgtgtgcgacgt 660
Query: 1019 gtggtacctgccgcccatgaccagggcggagaacgagacggccgtggacttcgccaacag 1078
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 661 gtggtacctgccgcccatgaccagggcggagaacgaaacggccgtcgacttcgccaacag 720
Query: 1079 ggtgaagggcgccatcgccaggcggggcggactcgtcgacctgatgtgggacggacagct 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggtgaagggcgccatcgccaggcggggcggactcgtcgacctgatgtgggacggacagct 780
Query: 1139 gaagaggatgaaggccaagaaggagtggcgcgagctgcagcaggaggagttcagcaggcg 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gaagaggatgaaggccaagaaggagtggcgcgagctgcagcaggaggagttcagcaggcg 840
Query: 1199 gctcaagggagagtgacttgcaacgcctgcaacaccagaacccgccggagccgccgggcg 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gctcaagggagagtgacttgcaacgcctgcaacaccagaacccgccggagccgccgggcg 900
Query: 1259 ggccgggcggcgtcacggaacccttcatgtaaatcacaataaacgaataaatgtataaat 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ggccgggcggcgtcacggaacccttcatgtaaatcacaataaacgaataaatgtataaat 960
Query: 1319 ggataaataaacaaatagt-catggcgcgggccggcgcggctcccgggagagtcagcggc 1377
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 961 ggataaataaacaaatagtncagcgcgcgggccggcgcggctcccgggagagtcagcggc 1020
Query: 1378 gccgctcggcccgcgccaacatacataataacttagtttcgatgtaagtaacgaccgcat 1437
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1021 gccgctcggcccgcgccaacatacataataacttag-ttcgatgtaagtaacgaccgcat 1079
Query: 1438 ttagagtgttcgtgtcccgggtgtggccgcagccgtctccggcgggcggggggaggcggt 1497
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1080 ttagagtgttcgtgtcccgggtgtggccgcagccgtcgccggcgggcggggggaggcggg 1139
Query: 1498 atgttagaatggctcaattgtgatgtgactctgtggtgcgc 1538
||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1140 atgttaggatggctcaattgtgatgtgactctgtggtgcgc 1180
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 142,902
Number of extensions: 2784
Number of successful extensions: 2784
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2782
Number of HSP's successfully gapped: 1
Length of query: 1714
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1697
Effective length of database: 8,119,229
Effective search space: 13778331613
Effective search space used: 13778331613
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)