BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10850 (UTR included)
(771 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 161 2e-39
BF01060B1D11 133 5e-31
>BF01047B2H03
Length = 758
Score = 161 bits (81), Expect = 2e-39
Identities = 226/273 (82%), Gaps = 1/273 (0%)
Strand = Plus / Minus
Query: 500 gatgggtctaaaaagaccatcgaagctctataaactcctgggagtttccaagagacaaat 559
|||| |||||||||| |||||| |||||||||||| | | |||||||||||||||| ||
Sbjct: 758 gatgagtctaaaaaggccatcggagctctataaacacttaagagtttccaagagacatat 699
Query: 560 cctgaggaaatctcctgatgacgtcgttaaattactcccaaaagagaaagataccccaga 619
|| | ||||| | | | |||| ||| ||| || |||| ||||| | | |||| |||| ||
Sbjct: 698 cccggggaaagcccataatgatgtcattacatcactctcaaaaaatagagatgcccctga 639
Query: 620 gctaaaggcaagactttaattccttaaacagttcatgatagcagcacaaagttac-agag 678
|||||| |||||||| |||||| ||||||||| ||||||| |||||||||| || ||||
Sbjct: 638 actaaagtcaagacttcaattccataaacagtttatgataggagcacaaagtaacgagag 579
Query: 679 tagggttaggatcaagtaaaaaggcccaagatacggatatggtaaagttttttagtcgac 738
|||| ||||||||||| || |||||||||||||||||||| | |||| ||||| ||| |
Sbjct: 578 taggattaggatcaaggaagaaggcccaagatacggatatattgaagtcttttattcggc 519
Query: 739 atgacgagaatgctaaatataagacccatgcaa 771
| |||||||||| | |||||| | ||||||||
Sbjct: 518 aagacgagaatgatggatataacatccatgcaa 486
>BF01060B1D11
Length = 799
Score = 133 bits (67), Expect = 5e-31
Identities = 237/291 (81%), Gaps = 2/291 (0%)
Strand = Plus / Minus
Query: 483 gatcgcaatagttttgagatgggtctaaaaagaccatcgaagctctataaactcctggga 542
|||||||||||||||| |||| |||||||||| |||||| |||||||||||| | | ||
Sbjct: 604 gatcgcaatagttttgggatgagtctaaaaaggccatcggagctctataaacacttaaga 545
Query: 543 gtttccaagagacaaatcctgaggaaatctcctgatgacgtcgttaaattactcccaaaa 602
|||||||||||||| |||| | ||||| | | | |||| ||| ||| || ||||||||||
Sbjct: 544 gtttccaagagacatatcccggggaaagcccataatgatgtcattacatcactcccaaaa 485
Query: 603 gagaaagataccccagagctaaaggc-aagactttaattccttaaacagttcatgatagc 661
|||| |||||| |||||| | |||||| |||||| |||||||| |||||||
Sbjct: 484 accggagatggcccagaactaaagtctgagacttcaattccacaaacagtttatgatagg 425
Query: 662 agcacaaagttac-agagtagggttaggatcaagtaaaaaggcccaagatacggatatgg 720
|||||||||| || |||||||| ||||||||||| || ||||| ||||||| ||||||
Sbjct: 424 agcacaaagtaacgagagtaggattaggatcaaggaagaaggctcaagatatggatatat 365
Query: 721 taaagttttttagtcgacatgacgagaatgctaaatataagacccatgcaa 771
| |||| ||||| || || |||||||||| | |||||||| ||||||||
Sbjct: 364 tgaagtattttattcagcaagacgagaatgatggatataagatccatgcaa 314
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 132,325
Number of extensions: 25666
Number of successful extensions: 25666
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 25665
Number of HSP's successfully gapped: 3
Length of query: 771
Length of database: 8,280,457
Length adjustment: 16
Effective length of query: 755
Effective length of database: 8,128,713
Effective search space: 6137178315
Effective search space used: 6137178315
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 33 (65.9 bits)