BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10855 (UTR included)
(2221 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040A1H07 729 0.0
BF01015B1E01 262 2e-69
>BF01040A1H07
Length = 794
Score = 729 bits (368), Expect = 0.0
Identities = 371/372 (99%)
Strand = Plus / Plus
Query: 1448 atgttgtaacaatatggtctaccattgtataattttcaagactgaaagaggttacggttt 1507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 atgttgtaacaatatggtctaccattgtataattttcaagactgaaagaggttacggttt 482
Query: 1508 tgcagaaccttataatattcataaaacattaaatgaacttgtactgcattatgctgcaaa 1567
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 483 tgcagaaccttataatattcataaaacattaaatgaacttgtactacattatgctgcaaa 542
Query: 1568 ctcattagacgaacacaatgaacaattgcgaacctcactgaaatatcctgtgaatgcaca 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ctcattagacgaacacaatgaacaattgcgaacctcactgaaatatcctgtgaatgcaca 602
Query: 1628 cttagtaaaaaaaccggataaggaaatgcatcatgaatcccaccttcagccatatcatcg 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 cttagtaaaaaaaccggataaggaaatgcatcatgaatcccaccttcagccatatcatcg 662
Query: 1688 caaacaaagaaaacaaagacagcctctgccgtaatatagccatatcaaaatgttggccta 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 caaacaaagaaaacaaagacagcctctgccgtaatatagccatatcaaaatgttggccta 722
Query: 1748 attctttcctagtcggcatatgaatgacaagactagagtaattgattctaaagtcaattt 1807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 attctttcctagtcggcatatgaatgacaagactagagtaattgattctaaagtcaattt 782
Query: 1808 gatggaagccat 1819
||||||||||||
Sbjct: 783 gatggaagccat 794
Score = 708 bits (357), Expect = 0.0
Identities = 367/369 (99%), Gaps = 1/369 (0%)
Strand = Plus / Plus
Query: 1081 ctcaaccgcatgaaaagaatgatcttatcgaaaacaatagacagcttatatcaaaagtga 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ctcaaccgcatgaaaagaatgatcttatcgaaaacaatagacagcttatatcaaaagtga 71
Query: 1141 acagctttaaacaagccagggctcagcttcacaacatacttagagaaacagttgaatcta 1200
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 72 acagctttaaacaagccagggctcagct-cacaacatacttagagaaacagttgaatcta 130
Query: 1201 atttactattggaaagagaaataaccaaactgaaatcggaaatcataaatttgtacaaaa 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 atttactattggaaagagaaataaccaaactgaaatcggaaatcataaatttgtacaaaa 190
Query: 1261 taaaagatcgctacaaaaagttattacaaagacggggaaaaacagaagaatatttgcagg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 taaaagatcgctacaaaaagttattacaaagacggggaaaaacagaagaatatttgcagg 250
Query: 1321 ccctagaagaagacaatatacataagttagaaaaactatacgcccacagagaaatggtaa 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ccctagaagaagacaatatacataagttagaaaaactatacgcccacagagaaatggtaa 310
Query: 1381 cttggatggtggaaaattgtaccagggatatggcggagaaactactgaaaggaaagcctc 1440
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 311 cttggatggtggaaaattgtactagggatatggcggagaaactactgaaaggaaagcctc 370
Query: 1441 aaggaacat 1449
|||||||||
Sbjct: 371 aaggaacat 379
>BF01015B1E01
Length = 417
Score = 262 bits (132), Expect = 2e-69
Identities = 132/132 (100%)
Strand = Plus / Plus
Query: 2090 taatagagtaagtattgatttgtcagtgacataatcattcagtgctaatttatttataaa 2149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taatagagtaagtattgatttgtcagtgacataatcattcagtgctaatttatttataaa 60
Query: 2150 atctcaatgtacaatgtatactttgtgagtgataataatttttttttttaaacacttaaa 2209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctcaatgtacaatgtatactttgtgagtgataataatttttttttttaaacacttaaa 120
Query: 2210 aattgtattaaa 2221
||||||||||||
Sbjct: 121 aattgtattaaa 132
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 307,457
Number of extensions: 7952
Number of successful extensions: 7952
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7951
Number of HSP's successfully gapped: 3
Length of query: 2221
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2204
Effective length of database: 8,119,229
Effective search space: 17894780716
Effective search space used: 17894780716
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)