BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10862 (UTR included)
(6418 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033B1A08 1639 0.0
>BF01033B1A08
Length = 843
Score = 1639 bits (827), Expect = 0.0
Identities = 839/843 (99%)
Strand = Plus / Plus
Query: 3168 gaaataatcgctatccccgaggctccttgtttgaaagagaacgaagaagttaccgaaatg 3227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaataatcgctatccccgaggctccttgtttgaaagagaacgaagaagttaccgaaatg 60
Query: 3228 gtgaatcttaaaaacgataaacattccaggcgaataaatggagacaaaacgttcaatact 3287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgaatcttaaaaacgataaacattccaggcgaataaatggagacaaaacgttcaatact 120
Query: 3288 tatgttattcacgaggaaccggtcaatgaaccctcggatctgtttgttaaattatccgat 3347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatgttattcacgaggaaccggtcaatgaaccctcggatctgtttgttaaattatccgat 180
Query: 3348 ttggataaaccgttacagaaatctgatatattcgaaaaaaattgcttcgagtcaagaatg 3407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttggataaaccgttacagaaatctgatatattcgaaaaaaattgcttcgagtcaagaatg 240
Query: 3408 accaggtcgataccggataacaaatggtcacaacaaaccctcggaggatcttccaggtct 3467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accaggtcgataccggataacaaatggtcacaacaaaccctcggaggatcttccaggtct 300
Query: 3468 agtgaagtgattagttcctttcattctgagaatgcgttgagtctgaacaggctttttccc 3527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtgaagtgattagttcctttcattctgagaatgcgttgagtctgaacaggctttttccc 360
Query: 3528 cacctgaaaaacgagttcagtaggagcatgccgatatcactatcaactagaacaagatct 3587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cacctgaaaaacgagttcagtaggagcatgccgatatcactatcaactagaacaagatct 420
Query: 3588 ccatcaagaccgactgcattgagcgtgggcgagatggatgatcaggtttccgatgtatcg 3647
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 421 ccatcaagaccgactgcatcgagcgtgggcgagatggatgatcaggtttctgatgtatcg 480
Query: 3648 gaaatgagtagtgtacaaagcagtatatgtcgttctgtagtcgaaaatagtacaacagaa 3707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaaatgagtagtgtacaaagcagtatatgtcgttctgtagtcgaaaatagtacaacagaa 540
Query: 3708 gaaactagtcaaacttcgagtttaataggtaactgtcagtctcgtttgggacaggatttg 3767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaaactagtcaaacttcgagtttaataggtaactgtcagtctcgtttgggacaggatttg 600
Query: 3768 cttcgtatgttcttagaggagatagcccctgacgttatagtcgaagtatcaggaaagaga 3827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cttcgtatgttcttagaggagatagcccctgacgttatagtcgaagtatcaggaaagaga 660
Query: 3828 attaaagcacataaatgtattctatcatctaggtgtcagtactttgcaggtatactaagt 3887
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 661 attaaagcacataaatgtattctatcatctaggtgtcagtactttgcaggtatactgagc 720
Query: 3888 ggcggttgggtcgaaagtgctgggaacgtcatcgttttaccaccgttctcatttaacgtg 3947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggcggttgggtcgaaagtgctgggaacgtcatcgttttaccaccgttctcatttaacgtg 780
Query: 3948 gtacacttcgctctgtgccatatatattccggtttgtctactatacccgattctataagt 4007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gtacacttcgctctgtgccatatatattccggtttgtctactatacccgattctataagt 840
Query: 4008 atc 4010
|||
Sbjct: 841 atc 843
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 124,008
Number of extensions: 15249
Number of successful extensions: 15249
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 15249
Number of HSP's successfully gapped: 1
Length of query: 6418
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6400
Effective length of database: 8,109,745
Effective search space: 51902368000
Effective search space used: 51902368000
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)