BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10863 (UTR included)
(2164 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047A1C04 1594 0.0
>BF01047A1C04
Length = 804
Score = 1594 bits (804), Expect = 0.0
Identities = 804/804 (100%)
Strand = Plus / Plus
Query: 1045 tcaagagaatatggagtgaacatccggaggaggaacgcagaactgttatcaggagggatc 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcaagagaatatggagtgaacatccggaggaggaacgcagaactgttatcaggagggatc 60
Query: 1105 gcctgctaggtgaactggcaccattaaggagtatgggtgactatagatataaatggaaaa 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcctgctaggtgaactggcaccattaaggagtatgggtgactatagatataaatggaaaa 120
Query: 1165 gtgaaatattaactgacatagtggtgccattaattggtcagaagggtgttccagccaatt 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgaaatattaactgacatagtggtgccattaattggtcagaagggtgttccagccaatt 180
Query: 1225 ataatacaccgccatacttgacagccaaaccagatgtgttttaccatagattgacatcca 1284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ataatacaccgccatacttgacagccaaaccagatgtgttttaccatagattgacatcca 240
Query: 1285 aggacaaatttatggtgatagcctctgatggtctatgggatatgttgactccgctgcaag 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggacaaatttatggtgatagcctctgatggtctatgggatatgttgactccgctgcaag 300
Query: 1345 ctgtcaagttggttggtgagcacatgaagggaaaagtgttcttcaatccacttaaattgc 1404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgtcaagttggttggtgagcacatgaagggaaaagtgttcttcaatccacttaaattgc 360
Query: 1405 caaagaataatatacaattaggtgacatcaatgaactactgctgcataggaaggaaagtt 1464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caaagaataatatacaattaggtgacatcaatgaactactgctgcataggaaggaaagtt 420
Query: 1465 tgaaaagtaaaccaaaagataggaatgcagccactcatctcataaggcatgctatcggtg 1524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgaaaagtaaaccaaaagataggaatgcagccactcatctcataaggcatgctatcggtg 480
Query: 1525 gtaccgaatatggtgtcgatcattcaagattggctcatttactgggtttatcaccagatg 1584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtaccgaatatggtgtcgatcattcaagattggctcatttactgggtttatcaccagatg 540
Query: 1585 tgagtcgtatgttcagagatgacatcacagtcaccgtagtatattttgactctgaatatc 1644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgagtcgtatgttcagagatgacatcacagtcaccgtagtatattttgactctgaatatc 600
Query: 1645 tcagacaatgtccagcataatcttataatgtataaatgtagttccttaaaatcacaattc 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcagacaatgtccagcataatcttataatgtataaatgtagttccttaaaatcacaattc 660
Query: 1705 atgctccataatggttattaaaaaatatgttgctattacgttcctaaagatattgagtca 1764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atgctccataatggttattaaaaaatatgttgctattacgttcctaaagatattgagtca 720
Query: 1765 tattttaacattttttaacagatcatttagttagtttgttacatgccatttgtaaattat 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tattttaacattttttaacagatcatttagttagtttgttacatgccatttgtaaattat 780
Query: 1825 aaatgtccgtgtccatatttatta 1848
||||||||||||||||||||||||
Sbjct: 781 aaatgtccgtgtccatatttatta 804
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 345,273
Number of extensions: 8308
Number of successful extensions: 8308
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8308
Number of HSP's successfully gapped: 1
Length of query: 2164
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2147
Effective length of database: 8,119,229
Effective search space: 17431984663
Effective search space used: 17431984663
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)