BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10892 (UTR included)
(4102 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2010_C1 1106 0.0
>BF14_2010_C1
Length = 898
Score = 1106 bits (558), Expect = 0.0
Identities = 570/573 (99%), Gaps = 2/573 (0%)
Strand = Plus / Plus
Query: 3532 gcattgctgtattctggaaacgatgtgcccgtattatcaagagacgcagacttgtctcac 3591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gcattgctgtattctggaaacgatgtgcccgtattatcaagagacgcagacttgtctcac 71
Query: 3592 tggccacctagcaggaggccacgccatccgaagaggtggcgaatgggagcgaataaaccc 3651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tggccacctagcaggaggccacgccatccgaagaggtggcgaatgggagcgaataaaccc 131
Query: 3652 cattgtacacaatgtacacactaaggccgacgtcaaaataacttgctaaggccgacgaca 3711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cattgtacacaatgtacacactaaggccgacgtcaaaataacttgctaaggccgacgaca 191
Query: 3712 caaccacaaattagggaatgtctctaatgatggtcataaatattaaagacctcttgtctt 3771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 caaccacaaattagggaatgtctctaatgatggtcataaatattaaagacctcttgtctt 251
Query: 3772 cttaaagttctatgttactgtctacgtttttgggctgaattgtagcatggctttattgat 3831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cttaaagttctatgttactgtctacgtttttgggctgaattgtagcatggctttattgat 311
Query: 3832 gttgaagattataaaataatatgcatattctatcctatcaacgtgtagagcttatgacgt 3891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gttgaagattataaaataatatgcatattctatcctatcaacgtgtagagcttatgacgt 371
Query: 3892 cactgtgtaccatagactaaggcaaagtctacttctatttaaaagtccatgtttcttgtt 3951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cactgtgtaccatagactaaggcaaagtctacttctatttaaaagtccatgtttcttgtt 431
Query: 3952 agtgttttattacactgtctacatttttgggccgctttaaagtctgaactgtagatagtt 4011
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 432 agtgttttattacactgtctacatatttgggccgctttaaagtctgaactgtagatagtt 491
Query: 4012 atattt--aaaaaaaaaaatcgatattatcaaatagtagagcttacgatggtgttatata 4069
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 atatttaaaaaaaaaaaaatcgatattatcaaatagtagagcttacgatggtgttatata 551
Query: 4070 ctatatatcatagactaaagataaattctattg 4102
|||||||||||||||||||||||||||||||||
Sbjct: 552 ctatatatcatagactaaagataaattctattg 584
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 405,031
Number of extensions: 9636
Number of successful extensions: 9636
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9633
Number of HSP's successfully gapped: 1
Length of query: 4102
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4084
Effective length of database: 8,109,745
Effective search space: 33120198580
Effective search space used: 33120198580
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)