BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10901 (UTR included)
(6280 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01061A2G11 668 0.0
>BF01061A2G11
Length = 709
Score = 668 bits (337), Expect = 0.0
Identities = 383/401 (95%), Gaps = 13/401 (3%)
Strand = Plus / Plus
Query: 4969 agaaatggctcatggaatccaaacttgcaaataaaccaaagcatttgacctataaggatc 5028
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 322 agaaatggctcatggaatccaaacttgcaaataaaccaaagcatttgacttataaggatc 381
Query: 5029 tagaaaaagtcgctgggaaaggtttttatcattggatgcgaccatacaaaaggtttcaac 5088
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tagaaaaagacgctgggaaaggtttttatcattggatgcgaccatacaaaaggtttcaac 441
Query: 5089 caaaacctataaaacccgacaatgtcctacctgaaagattgcctagagcatatgttttac 5148
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 caaaacccataaaacccgacaatgtcctacctgaaagattgcctagagcatatgttttac 501
Query: 5149 gaactcttgagcagcagtggagagacggcgatcgggaagagttgaaaggtgcaaaggagt 5208
| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 502 g-------------cagtggagagacggcgatcgggaagagttgaaaggtgcgaaggagt 548
Query: 5209 tgttaaatgcaatcctccgttatcgacatgtcatggaggctgacagtgaattgattctaa 5268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tgttaaatgcaatcctccgttatcgacatgtcatggaggctgacagtgaattgattctaa 608
Query: 5269 atgttcctatttacgacccaagaccagaagacgagaggactacgggcgagatagttcaag 5328
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 609 atgttcctatttacgacccaagaccagaagacgagagaactacgggcgagatagttcaag 668
Query: 5329 ctatagcccataaggtctatgaagatttgaagaatcgcttg 5369
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ctatagcccataaggtctatgaagatttgaagaatcgcttg 709
Score = 311 bits (157), Expect = 7e-84
Identities = 160/161 (99%)
Strand = Plus / Plus
Query: 4810 gcgaactaacctgttcagagttggtgcatcgtgctcttatagaacagtataaatcgaaat 4869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 gcgaactaacctgttcagagttggtgcatcgtgctcttatagaacagtataaatcgaaat 117
Query: 4870 gtcgatggaagccatggtgttccattaatcagtacgacacctttggtgatcatcggacat 4929
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 118 gtcgatggaagccatggtgttccattaatcagtacgatacctttggtgatcatcggacat 177
Query: 4930 tgtggtctattctatctcctgtgcagattaacgaaactgag 4970
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tgtggtctattctatctcctgtgcagattaacgaaactgag 218
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 162,983
Number of extensions: 30067
Number of successful extensions: 30067
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 30067
Number of HSP's successfully gapped: 3
Length of query: 6280
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6262
Effective length of database: 8,109,745
Effective search space: 50783223190
Effective search space used: 50783223190
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)