BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10904 (UTR included)
(1765 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043B2F11 1330 0.0
>BF01043B2F11
Length = 698
Score = 1330 bits (671), Expect = 0.0
Identities = 693/699 (99%), Gaps = 1/699 (0%)
Strand = Plus / Plus
Query: 344 agtatatattcaacaacgttatctagtatgtgcaaccttatgttgataacacaacatagg 403
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 agtatatattcaacaacgttatctagtatgtgcaaccttttgttgataacacaacatagg 60
Query: 404 ctaatattttaatatttgaccagctattacataattcgtaattttaacttcatttgcctc 463
||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 ctaatattttaatgtttgaccagctattacataattcgtaactttaacttcatttgcctc 120
Query: 464 taattaactctcggtttcaacagttaattattgtaaaatgtttaaaggtctcgtaggttt 523
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taatta-ctctcggttttaacagttaattattgtaaaatgtttaaaggtctcgtaggttt 179
Query: 524 agtaacaggaggcgcctcgggactcggcaggggaaccgctgaacatttggtaaagcatgg 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 agtaacaggaggcgcctcgggactcggcaggggaaccgctgaacatttggtaaagcatgg 239
Query: 584 aggcagggtcgttatttgtgacctcccaaatagtaagggccgtgagacagcaaaacagct 643
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 agggagggtcgttatttgtgacctcccaaatagtaagggccgtgagacagcaaaacagct 299
Query: 644 tgcaggaaatgctgcttttgtgccagttgatgttacatcagaggaggatgtaaaaaatgc 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tgcaggaaatgctgcttttgtgccagttgatgttacatcagaggaggatgtaaaaaatgc 359
Query: 704 tctacagacaacggttgataagttcgggagattggatgtggtagtcaactgtgcaggtat 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tctacagacaacggttgataagttcgggagattggatgtggtagtcaactgtgcaggtat 419
Query: 764 tattactgctagcagagtttacaatgtcaagaaagatcagccgtttgacctaaaggcttt 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tattactgctagcagagtttacaatgtcaagaaagatcagccgtttgacctaaaggcttt 479
Query: 824 ccaaaggacaattgatgtgaatttaattggaacattcaatgtaatccgtctagcagttgg 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ccaaaggacaattgatgtgaatttaattggaacattcaatgtaatccgtctagcagttgg 539
Query: 884 tttgatttctaaaaatgctccggatggggacggacagcggggagttattattaatactgc 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tttgatttctaaaaatgctccggatggggacggacagcggggagttattattaatactgc 599
Query: 944 cagtatcgcagcttttgatggacaaataggccaagcagcttattcagcgtctaaggctgg 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 cagtatcgcagcttttgatggacaaataggccaagcagcttattcagcgtctaaggctgg 659
Query: 1004 tattgtagggatgacgctacccatcgctcgggatctagc 1042
|||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tattgtagggatgacgctacccatcgctcgggatctagc 698
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 258,993
Number of extensions: 7117
Number of successful extensions: 7117
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7116
Number of HSP's successfully gapped: 1
Length of query: 1765
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1748
Effective length of database: 8,119,229
Effective search space: 14192412292
Effective search space used: 14192412292
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)