BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10910 (UTR included)
(1816 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055A1A01 1082 0.0
BF01022A2D03 68 5e-11
>BF01055A1A01
Length = 735
Score = 1082 bits (546), Expect = 0.0
Identities = 581/595 (97%), Gaps = 12/595 (2%)
Strand = Plus / Plus
Query: 457 ttgattttctgattttgcagaagtattgcaatatttaattaaagatgcctaaccaagtgt 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgattttctgattttgcagaagtattgcaatatttaattaaagatgcctaaccaagtgt 60
Query: 517 taattatagagccgcaaaatgaactgaagtttaaaa------------gcttctttgata 564
|||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 taattatagagccgcaaaatgaactgaagtttaaaattgattattcaggcttctttgata 120
Query: 565 tgggatgcactacttatatgaaactgacgaatccaactgatcataccgtgttgtttaaaa 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgggatgcactacttatatgaaactgacgaatccaactgatcataccgtgttgtttaaaa 180
Query: 625 ttaagacaacagcaccaaagaagtattgtgtgagacccaattcagggtttttggatccaa 684
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttaaaacaacagcaccaaagaagtattgtgtgagacccaattcagggtttttggatccaa 240
Query: 685 aatctaaagttgatatagctattacccctcaacctgtaaatgttgagtccaatgagaaaa 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatctaaagttgatatagctattacccctcaacctgtaaatgttgagtccaatgagaaaa 300
Query: 745 ataaacacaagtttatggtgcaaagtgttattgctccagaggggaaaattaacatagatc 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ataaacacaagtttatggtgcaaagtgttattgctccagaggggaaaattaacatagatc 360
Query: 805 aagtgtggaaggaaataaatcctaaacagctcatggattataaattaaagtgtgtctttg 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagtgtggaaggaaataaatcctaaacagctcatggattataaattaaagtgtgtctttg 420
Query: 865 aaacgccacaagtaaaaagcgctaatgattccggtgacaacgcagcggcgaacgaagtca 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaacgccacaagtaaaaagcgctaatgattccggtgacaacgcagcggcgaacgaagtca 480
Query: 925 ccaagaagagggtggctgtggccgacgagtcaaaaccagctgtgaaggactctgacggtg 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccaagaagagggtggctgtggccgacgagtcaaaaccagctgtgaaggactctgacggtg 540
Query: 985 tccagagcgaatcgaacagacgggatccggacgcggcggtgaaccagtcgacgga 1039
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 541 tccagagcgaatcgaacagacgggatccggacacggcggtgaaccagtcgacgga 595
Score = 258 bits (130), Expect = 3e-68
Identities = 138/142 (97%)
Strand = Plus / Plus
Query: 1152 gaggagttgttgcgtttgcaccagggcggtgccggtgagggccgtcccgcgcgcggccac 1211
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 594 gaggagttgttgcgtttgcaccnnnncggtgccggtgagggccgtcccgcgcgcggccac 653
Query: 1212 tcgtacggcccggagaagacggaacacgcggcgctcatggcatgggtggccaccgccata 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tcgtacggcccggagaagacggaacacgcggcgctcatggcatgggtggccaccgccata 713
Query: 1272 gccatggcattactcggcatca 1293
||||||||||||||||||||||
Sbjct: 714 gccatggcattactcggcatca 735
>BF01022A2D03
Length = 798
Score = 67.9 bits (34), Expect = 5e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 1115 ggaaagtattttaagacacgaaaatctccgattaaaag 1152
|||||| |||||||||||||||||||||||||||||||
Sbjct: 1 ggaaagcattttaagacacgaaaatctccgattaaaag 38
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 271,624
Number of extensions: 7023
Number of successful extensions: 7023
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7022
Number of HSP's successfully gapped: 4
Length of query: 1816
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1799
Effective length of database: 8,119,229
Effective search space: 14606492971
Effective search space used: 14606492971
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)