BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10920 (UTR included)
(2218 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1837_C1 1622 0.0
BF14_729_C3 163 1e-39
BF01044B2E12 105 3e-22
BF01012A1B09 101 5e-21
BF14_729_C2 96 3e-19
BF01019B1G10 84 1e-15
BF01024A1H07 84 1e-15
BF01011A1H06 80 2e-14
>BF14_1837_C1
Length = 908
Score = 1622 bits (818), Expect = 0.0
Identities = 886/907 (97%), Gaps = 10/907 (1%)
Strand = Plus / Plus
Query: 939 cacggtcgcggtggtcagtcagcgctccgtttcgcccgtctccgtatggagaagaggcac 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cacggtcgcggtggtcagtcagcgctccgtttcgcccgtctccgtatggagaagaggcac 61
Query: 999 aactacgtgaggaaggtggcagaggtcgccacacagctgttcatcagcgctgacagacct 1058
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 62 aactacgtgaggaaggtggcagaggttgccacacagctgttcatcagcgctgacagacct 121
Query: 1059 aacgtagcgggtctcatactcgccggttccgcggacttcaagaccgaactatcacagtct 1118
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 122 aacgtagcgggtctcatactcgccggttccgcggacttcaagaccgaactgtcacagtct 181
Query: 1119 gatatgtttgatccgcgtctccaatccaagatcatcaagctggtggacgtgtcgtacggc 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 182 gatatgtttgatccgcgtctccaatccaagatcatcaagctggtggacgtgtcatacggc 241
Query: 1179 ggtgagaacggtttcaaccaggccatcgagctggcagccgagtccctacagaacgttaag 1238
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggcgagaacggtttcaaccaggccatcgagctggcagccgagtccctacagaacgttaag 301
Query: 1239 ttcatacaggagaagaaactcatcgggagatactttgatgagatctcacaggacacagga 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttcatacaggagaagaaactcatcgggagatactttgatgagatctcacaggacacagga 361
Query: 1299 aaatactgttttggtgtcgatgatacattaagggctttggaactcggagctgttgagaca 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aaatactgttttggtgtcgatgatacattaagggctttggaactcggagctgttgagaca 421
Query: 1359 ctcatatgctgggaaaatctagacattcaaagatatgttttgaaatctcacgcaaccagc 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ctcatatgctgggaaaatctagacattcaaagatatgttttgaaatctcacgcaaccagc 481
Query: 1419 caggagactatcttgcatctgacaccggaacaggaaaaagacaagtcacacttcaccgac 1478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 caggagactatcttgcatctgacaccggaacaggaaaaagacaagtcacacttcaccgac 541
Query: 1479 aaagacactggcgtggaattggagctggtggaatgtcaacctcttttggagtggctcgcc 1538
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 542 aaagacactggcgtggaattggagcttgtggaatgtcaacctcttttggagtggctcgcc 601
Query: 1539 aacaactacaaatcattcggagcaaccctggagatcataacggacaagagccaggagggg 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aacaactacaaatcattcggagcaaccctggagatcataacggacaagagccaggagggg 661
Query: 1599 agtcagtttgttagaggattcggtggaatcggcggtctccttcgctacaaggtggatttc 1658
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 662 agtcagtttgttagaggattcggtggaatcggcggtcttcttcgctacaaggtggatttc 721
Query: 1659 caatcaatgcagcttgatgatgaagagattgacaacttgtatgacatcgacgactattag 1718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 caatcaatgcagcttgatgatgaagagattgacaacttgtatgacatcgacgactattag 781
Query: 1719 gcatcggttttagttgtaacggtttacagacagacatacacacacccacatacatacaca 1778
|||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||
Sbjct: 782 gcatcggttttagttgtagcggtttacagacagacattcacacacccacatacatataca 841
Query: 1779 cacatacacacat----atacatacacacac-----acaacacgagaaagac-tttgaaa 1828
||| |||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 842 tacacacacacatacatatacatacacacacacacaacaacacgagaaagacttttgaaa 901
Query: 1829 tattgta 1835
|||||||
Sbjct: 902 tattgta 908
>BF14_729_C3
Length = 2041
Score = 163 bits (82), Expect = 1e-39
Identities = 103/110 (93%)
Strand = Plus / Plus
Query: 3 ctcgtctgcccgtgatcacgtttgctgcaaagtagacgagacgtcgggattatgtagttt 62
|||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||
Sbjct: 1589 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagttt 1648
Query: 63 ttaaataattaaatccgcgtagtaaatccgaataatactagtttcattta 112
||||||||| |||||||||||||| |||||||||||||||| ||||||||
Sbjct: 1649 ttaaataataaaatccgcgtagtatatccgaataatactagcttcattta 1698
>BF01044B2E12
Length = 823
Score = 105 bits (53), Expect = 3e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 43 acgtcgggattatgtagtttttaaataattaaatccgcgtagtaaatccgaataatacta 102
||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||
Sbjct: 12 acgtcgggattatgtagnnnttaaataataaaatccgcgtagtaaatccgaaaaatacta 71
Query: 103 gtttcattta 112
||||||||||
Sbjct: 72 gtttcattta 81
>BF01012A1B09
Length = 841
Score = 101 bits (51), Expect = 5e-21
Identities = 90/103 (87%)
Strand = Plus / Minus
Query: 10 gcccgtgatcacgtttgctgcaaagtagacgagacgtcgggattatgtagtttttaaata 69
||||||||||||| ||||| |||||| ||| ||||||||||||||||||||| |||||
Sbjct: 841 gcccgtgatcacggctgctgaaaagtaaccgaaacgtcgggattatgtagttttaaaata 782
Query: 70 attaaatccgcgtagtaaatccgaataatactagtttcattta 112
|| ||||||||||||| ||||||| ||| ||||||||||||
Sbjct: 781 ataaaatccgcgtagtgtatccgaaatatattagtttcattta 739
>BF14_729_C2
Length = 1289
Score = 95.6 bits (48), Expect = 3e-19
Identities = 98/112 (87%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 3 ctcgtctgcccgtgatcacgtttgctgcaaagtagacgagacgtcgggattatgtagttt 62
|||||||||||||||||||| |||||| |||||| ||| ||||||||| ||||||||||
Sbjct: 529 ctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcgggagtatgtagttt 588
Query: 63 ttaa-ataattaaatc-cgcgtagtaaatccgaataatactagtttcattta 112
|||| | || |||| | |||||||| ||||||||||| |||||||||||||
Sbjct: 589 ttaacaaaaataaagcacgcgtagtttatccgaataattctagtttcattta 640
>BF01019B1G10
Length = 488
Score = 83.8 bits (42), Expect = 1e-15
Identities = 82/94 (87%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 7 tctgcccgtgatcacgtttgctgcaaagtagacgagacgtcgggattatgtagttttt-a 65
|||||||||||||||| || ||| |||| | ||| |||||||||||||||||||||| |
Sbjct: 398 tctgcccgtgatcacggttactgaaaaggaaccgaaacgtcgggattatgtagtttttaa 339
Query: 66 aataattaaatccgcgtagtaaatccgaataata 99
|||||| |||| |||||||||||| |||| ||||
Sbjct: 338 aataataaaattcgcgtagtaaatgcgaaaaata 305
>BF01024A1H07
Length = 726
Score = 83.8 bits (42), Expect = 1e-15
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 3 ctcgtctgcccgtgatcacgtttgctgcaaagtagacgagacgtcgggattatgtagttt 62
|||||||||||||||||||| |||||| |||||| ||| ||||| | ||||||||| ||
Sbjct: 648 ctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcngnattatgtagntt 707
Query: 63 ttaaataattaaatccgcg 81
| ||||||| |||||||||
Sbjct: 708 taaaataataaaatccgcg 726
>BF01011A1H06
Length = 739
Score = 79.8 bits (40), Expect = 2e-14
Identities = 96/112 (85%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 3 ctcgtctgcccgtgatcacgtttgctgcaaagtagacgagacgtcgggattatgtagt-t 61
|||||||||||||||||||| || ||| |||||| ||| ||||||||| |||||||| |
Sbjct: 461 ctcgtctgcccgtgatcacggttactgaaaagtaaccgaaacgtcgggagtatgtagtct 520
Query: 62 tttaaataattaaatc-cgcgtagtaaatccgaataatactagtttcattta 112
|||| | || |||||| |||||||| ||||||| |||||||| ||||||||
Sbjct: 521 tttacaaaaataaatcacgcgtagtttatccgaaaaatactagattcattta 572
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 212,440
Number of extensions: 4533
Number of successful extensions: 4533
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 4521
Number of HSP's successfully gapped: 8
Length of query: 2218
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2201
Effective length of database: 8,119,229
Effective search space: 17870423029
Effective search space used: 17870423029
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)