BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10924 (UTR included)
(2143 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062A1C11 1600 0.0
>BF01062A1C11
Length = 843
Score = 1600 bits (807), Expect = 0.0
Identities = 834/843 (98%)
Strand = Plus / Plus
Query: 1210 tgaataaacaacaagtaccagtggtaccgaaggaatggccacgactcgctgcatgggctg 1269
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 tgaataaacaacaagtaccagtggtaccgaaggaatggccacgactcgctgcttgggctg 60
Query: 1270 atagaatcctaaaacgatacagtcgtatgaacgttggacagcaacaagaacggttagtga 1329
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 acagaatcctaaaacgatacagtcgcatgaacgttggacagcaacaagaacggttagtga 120
Query: 1330 atgtccacccgtcatcgccaaaccacgaatcggactccgacacgacgcagtcgttcacaa 1389
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 121 atgtccacccgtcatcgccaaaccacgaatcggactccgacacgacgcagtcgttctcaa 180
Query: 1390 cattcaaaccaccgtcatattccccaacgtcatacggaagccacattttagataaggatt 1449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cattcaaaccaccgtcatattccccaacgtcatacggaagccacattttagataaggatt 240
Query: 1450 tagaaacccagatggaatggagcgacactggcaggccaccgagctattcccagatagaaa 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagaaacccagatggaatggagcgacactggcaggccaccgagctattcccagatagaaa 300
Query: 1510 gagacagcgaagctatcgtcctctcagatccatgggagaggcgcccgatagtacggcgag 1569
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 301 gagacagcgaagctatcgtcctctcagatccatgggagaggcgcccgatagtacgacgag 360
Query: 1570 agagcgtatggctagaagacgaactgtttgaaatgacgcgacgtccccaagacgaactta 1629
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 361 agagcgtatggctagaagacgaactgtttgaaatgacacgacgtccccaagacgaactta 420
Query: 1630 ccacagagctatgaccatagacaattgattctataatctcataagtacaaatctcattag 1689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccacagagctatgaccatagacaattgattctataatctcataagtacaaatctcattag 480
Query: 1690 gtgtatcatatctagatatgtaagattatataaaagtattaataatgtcagtggtgctca 1749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtgtatcatatctagatatgtaagattatataaaagtattaataatgtcagtggtgctca 540
Query: 1750 tttaaatcatgagagctgattttgttatacagtaagtagtaattattagctaagttgaaa 1809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttaaatcatgagagctgattttgttatacagtaagtagtaattattagctaagttgaaa 600
Query: 1810 tatataccacctaatatataaaatattgttaagtagcagtctaacgagggttaaaaactg 1869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tatataccacctaatatataaaatattgttaagtagcagtctaacgagggttaaaaactg 660
Query: 1870 tttttattttgtttttgttattcagtacgttatacttggaaagttttaaagaaatgcgac 1929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tttttattttgtttttgttattcagtacgttatacttggaaagttttaaagaaatgcgac 720
Query: 1930 gccttttgtaattatttttttatatttctagaattgtgtaataaaaatgtattgttctcc 1989
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gcctcttgtaataatttttttatatttctagaattgtgtaataaaaatgtattgttctcc 780
Query: 1990 gagacaaaacagaacagaagtaacataaaatggaaatttcttttaataattaaaaaataa 2049
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 781 gagacaaaacagaacagaagtaacataaaatggaaatttcttttaatcattaaaaaataa 840
Query: 2050 aca 2052
|||
Sbjct: 841 aca 843
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 264,290
Number of extensions: 5815
Number of successful extensions: 5815
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5815
Number of HSP's successfully gapped: 1
Length of query: 2143
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2126
Effective length of database: 8,119,229
Effective search space: 17261480854
Effective search space used: 17261480854
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)