BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10929 (UTR included)
(2416 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037A1F08 729 0.0
BF01059A2E09 549 e-156
>BF01037A1F08
Length = 705
Score = 729 bits (368), Expect = 0.0
Identities = 371/372 (99%)
Strand = Plus / Plus
Query: 258 atccttccactttaacaaaaaaataaaacatccacctaaaacaaacctagcacaaccatt 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atccttccactttaacaaaaaaataaaacatccacctaaaacaaacctagcacaaccatt 60
Query: 318 cgtacagctaaatgaagaataatttcctgtaagaatgcactggcaatgacgttctatttt 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgtacagctaaatgaagaataatttcctgtaagaatgcactggcaatgacgttctatttt 120
Query: 378 gagcccaaataattttctatggatagtggccaaaggttaaatttttagtgcatttcggta 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcccaaataattttctatggatagtggccaaaggttaaatttttagtgcatttcggta 180
Query: 438 tgaagtcatgaagtaacattgcgtttggagtagatcgaccctcccccgttgtttgtggct 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaagtcatgaagtaacattgcgtttggagtagatcgaccctcccccgttgtttgtggct 240
Query: 498 gaaatggatgatttcaaactgagagctggtgaaaaaattggggctttgcatgatgccgct 557
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 241 gaaatggatgatttcaaactgagagctggagaaaaaattggggctttgcatgatgccgct 300
Query: 558 ctgggtgtagcaaataacagcaaaatcaaaatcaatgatgctattgataaaaccgttgag 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgggtgtagcaaataacagcaaaatcaaaatcaatgatgctattgataaaaccgttgag 360
Query: 618 gctgcaaagaag 629
||||||||||||
Sbjct: 361 gctgcaaagaag 372
>BF01059A2E09
Length = 870
Score = 549 bits (277), Expect = e-156
Identities = 325/340 (95%), Gaps = 2/340 (0%)
Strand = Plus / Minus
Query: 628 agatccgagaggttgtgttagagttgtggcagcatgagttagtgttagagggccgggcgc 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 agatccgagaggttgtgttagagttgtggcagcatgagttagtgttagagggccgggcgc 329
Query: 688 gagcggcggcctgggcggccgaggcggtgcgcagaatcagagagggcgctctgcccctct 747
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 328 gagcggcggcctgggcggccgaggcggtgcgcagaatcagagagggcgctcttcccctct 269
Query: 748 ctccggccgtcttataccaagacctggtcgacctgttcaaggatagagtatggcgtcgca 807
||||||| |||||||||||||||||||||||| | | ||||||||||||||
Sbjct: 268 ctccggctgtcttataccaagacctggtcgacaaaacacat--tccagtatggcgtcgca 211
Query: 808 gtatggtgatcttcgtatgtggcgttgcggtgggcgggggcgcgggcctaatggtcgggc 867
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gtatgatgatcttcgtatgtggcgttgcggtgggcgggggcgcgggcctaatggtcgggc 151
Query: 868 tccgggccgggacccgcgctcctctcggacctcacgctagggcgctgcacacgcaaagcg 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 tccgggccgggacccgcgctcctctcggacctcacgctagggcgctgcacacgcaaagcg 91
Query: 928 atcagaccgtcctcctggtagaggatgctgtgtctccggg 967
||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 atcagaccgtcctcctggtagaggatgctgtgtctccggg 51
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 292,422
Number of extensions: 7429
Number of successful extensions: 7429
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7429
Number of HSP's successfully gapped: 3
Length of query: 2416
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2399
Effective length of database: 8,119,229
Effective search space: 19478030371
Effective search space used: 19478030371
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)