BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10930 (UTR included)
(1366 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_323_C2 829 0.0
>BF14_323_C2
Length = 1690
Score = 829 bits (418), Expect = 0.0
Identities = 513/547 (93%), Gaps = 17/547 (3%)
Strand = Plus / Plus
Query: 443 gagacttccagaaaatggtcaaccgttttggttttggatagaacctgcactcttccttat 502
||||||||||||||||||||| | | |||| || ||||| || |||||||| ||||||||
Sbjct: 1119 gagacttccagaaaatggtcagcagctttgattatggatcgagcctgcactattccttat 1178
Query: 503 gaacttcctccacccagagaagg--taaagcctg---------------gagatattgtt 545
||||||||||| ||||||||||| ||||||||| ||||| |||||
Sbjct: 1179 gaacttcctccgcccagagaagggttaaagcctgtacaactacaacctggagatgttgtt 1238
Query: 546 tacaacatggtaatatgtatccacaaggaccccatctaccatcccaaccctgaaaagttt 605
||||||||||| | |||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 1239 tacaacatggttaattgtatccacatggaccccatctaccatcccagccctgaaaagttt 1298
Query: 606 gatcccgaaagattttccgatgagaacaagcataaaatcaaaccatttacatatatgcct 665
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1299 gaacccgaaagattttccgatgagaacaagcataaaatcaaaccatttacatatatgcct 1358
Query: 666 tttggcatgggtccgcggatctgcattgggataagattcgcgcaacttgaaattaaaatt 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1359 tttggcatgggtccgcggatctgcattgggataagattcgcgcaacttgaaattaaaatt 1418
Query: 726 ctgatatttgaactattgttaaacttcaagatcgttaaatgcccaaaaactatggaccct 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1419 ctgatatttgaactattgttaaacttcaagatcgttaaatgcccaaaaactatggaccct 1478
Query: 786 gtggtattgaaaccagacacttttaatatactaccaaaagatgattctattgtccgattt 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1479 gtggtattgaaaccagacacttttaatatactaccaaaagatgattctattgtccgattt 1538
Query: 846 gtgcccagatatgatcattgatagtgttgggaaattccttgggaaagacctattttcttt 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1539 gtgcccagatatgatcattgatagtgttgggaaattccttgggaaagacctattttcttt 1598
Query: 906 taagttaattgtcatctatagcctatttttttttttcatgtttttataataaaatttaat 965
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1599 taagttaattgtcatctatagcctatatttttttttcatgtttttataataaaatttaat 1658
Query: 966 aataaaa 972
|||||||
Sbjct: 1659 aataaaa 1665
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 196,892
Number of extensions: 5257
Number of successful extensions: 5257
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5257
Number of HSP's successfully gapped: 2
Length of query: 1366
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1349
Effective length of database: 8,119,229
Effective search space: 10952839921
Effective search space used: 10952839921
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)