BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10935 (UTR included)
(2017 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1847_C1 1518 0.0
>BF14_1847_C1
Length = 1163
Score = 1518 bits (766), Expect = 0.0
Identities = 801/812 (98%), Gaps = 3/812 (0%)
Strand = Plus / Plus
Query: 768 gagtgtggtgggccgaaccaagagaaccgcatagttggtggtatgccagccggcgtgaac 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gagtgtggtgggccgaaccaagagaaccgcatagttggtggtatgccagccggcgtgaac 414
Query: 828 cggtatccctggatggcaaggcttgtttatgatggtcagttccactgtggagcatccttg 887
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 415 cggtatccctggatggcaaggcttgtttatgatggtcagttccactgtggagcatctttg 474
Query: 888 ctaaccaaggagtatgtattgacagccgctcattgtgtgcgtaaactaaaacgctccaaa 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ctaaccaaggagtatgtattgacagccgctcattgtgtgcgtaaactaaaacgctccaaa 534
Query: 948 atccgtgtcattcttggcgaccatgatcaaaccataacgtctgaaagtccggccataatg 1007
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 535 atccgtgtcattctcggcgaccatgatcaaactataacgtctgaaagtccggccataatg 594
Query: 1008 cgtgctgtcaccgccatagtaagacatcgaagtttcgactccgactcatacaacaacgac 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 cgtgctgtcaccgccatagtaagacatcgaagtttcgactccgactcatacaacaacgac 654
Query: 1068 attgcattgttgaaactacggaaaccagtgaccttctcaaagatcatcaaaccagtttgc 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 attgcattgttgaaactacggaaaccagtgaccttctcaaagatcatcaaaccagtttgc 714
Query: 1128 ctaccaccagcaagtattgaaccatctggaaaagagggaatcgtggtaggctggggccgt 1187
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 715 ctaccaccagcaagtattgaaccatctggaaaagaaggaatcgtggtaggctggggccgt 774
Query: 1188 acttcggaggggggtcagctacctgctgtggttcaggaagtcagggtgccaattctatca 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 acttcggaggggggtcagctacctgctgtggttcaggaagtcagggtgccaattctatca 834
Query: 1248 ctgtcgcagtgccgcggaatgaagtatagggctacaagaatcactaataatagatcgctt 1307
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 835 ctgtcgcagtgccgcggaatgaagtatagggctacaagaatcactaataaca---tgctt 891
Query: 1308 tgcgcggggcgatcgtcaactgactcctgtcaaggagacagcggaggccccttgctcata 1367
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 892 tgcgcggggcgatcgtcaactgactcctgtcaaggtgacagcggaggccccttgctcata 951
Query: 1368 caacagggtgacagattccaaatagtcggtatagtgtcatggggcgtaggttgtggaagg 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 caacagggtgacagattccaaatagtcggtatagtgtcatggggcgtaggttgtggaagg 1011
Query: 1428 ccgggctaccccggcgtgtacactcgcattacacgctacttaccgtggttgcgcgctaat 1487
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1012 ccgggctaccccggcgtgtacactcgcatcacacgctacttaccgtggttgcgcgctaat 1071
Query: 1488 ttgaaagacacgtgcctgtgtgctaattaaaattttacttttcaaaataacaaagcggtt 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttgaaagacacgtgcctgtgtgctaattaaaattttacttttcaaaataacaaagcggtt 1131
Query: 1548 ttctgtcattgctcacgattatacatattttg 1579
||||||||||||||||||||||||||||||||
Sbjct: 1132 ttctgtcattgctcacgattatacatattttg 1163
Score = 242 bits (122), Expect = 2e-63
Identities = 128/130 (98%)
Strand = Plus / Plus
Query: 603 gtatccacgggcaacaggacacaaagatttttgttcgacgccatcttcggtcttgaagtg 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 gtatccacgggcaacaggacacaaagatttttgttcgacgccatcttcggtcttgaagtg 209
Query: 663 ccgattttggatgatccaagcgtggaggaagatgaagaagaggaaccccaagtcaggaat 722
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 210 ccgattttggatgatccaagcgtggaggaagatgaagaagaagaacctcaagtcaggaat 269
Query: 723 tgttcctgtg 732
||||||||||
Sbjct: 270 tgttcctgtg 279
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 311,424
Number of extensions: 8536
Number of successful extensions: 8536
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8536
Number of HSP's successfully gapped: 3
Length of query: 2017
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2000
Effective length of database: 8,119,229
Effective search space: 16238458000
Effective search space used: 16238458000
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)