BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10942 (UTR included)
(1924 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1855_C1 1526 0.0
>BF14_1855_C1
Length = 812
Score = 1526 bits (770), Expect = 0.0
Identities = 787/793 (99%)
Strand = Plus / Plus
Query: 644 ggatattgttgatgttgttgttatgaaggatccacagaccaagaggtctcgcggtttcgg 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggatattgttgatgttgttgttatgaaggatccacagaccaagaggtctcgcggtttcgg 61
Query: 704 ttttataacttattcccgggctcatatggtagatgatgctcagaaaaacagacctcacaa 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttttataacttattcccgggctcatatggtagatgatgctcagaaaaacagacctcacaa 121
Query: 764 gattgatggaagaattgtagaaccaaagcgagctgtaccaagagaagagatcaaaaggcc 823
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 122 gattgatggaagaattgtagaaccaaaacgagctgtaccaagagaagagatcaaaaggcc 181
Query: 824 ggatgcaagtgcaacagtcaagaaactgtttattggaggtataaaacaagatattgaaga 883
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ggatgctagtgcaacagtcaagaaactgtttattggaggtataaaacaagatattgaaga 241
Query: 884 ggaagacttgagagaatacttcagcaaatttggcgaaattatttcagtgagtttagtaac 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggaagacttgagagaatacttcagcaaatttggcgaaattatttcagtgagtttagtaac 301
Query: 944 agaaaaagacactggaaagaaaagaggctttggatttattgaatttgatgattacgatcc 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agaaaaagacactggaaagaaaagaggctttggatttattgaatttgatgattacgatcc 361
Query: 1004 agttgatagaatatgcttacaaccaagccacaaggttaaaggtcgtcgcttggatgttaa 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agttgatagaatatgcttacaaccaagccacaaggttaaaggtcgtcgcttggatgttaa 421
Query: 1064 aaaggctatatcaaagacagtgatggcatctagtggtagtaggggacggagtggaagatg 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaaggctatatcaaagacagtgatggcatctagtggtagtaggggacggagtggaagatg 481
Query: 1124 gggtaatagacaattacaggattggaatacagatggcgcctttgattcaggctacgagca 1183
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 482 gggtaatagacaattacaggattggaatacagatggcgcctttgattcaggatacgagca 541
Query: 1184 gggttggaacaaccagaatccttgggataattcaggcaattggggcaaccagggttatga 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gggttggaacaaccagaatccttgggataattcaggcaattggggcaaccagggttatga 601
Query: 1244 tcaaggttggcagggcgactttgggagtggatatcaacaaaactatggtggagggccaat 1303
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tcaagnttggcagggcgactttgggagtggatatcaacaaaactatggtggagggccaat 661
Query: 1304 gagacctaattttagtaatacacgacaacagccctataatgcaggtggtggctacaacag 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gagacctaattttagtaatacacgacaacagccctataatgcaggtggtggctacaacag 721
Query: 1364 cggcaatccttccaacttcaacaactctggcaacactcccaacaactctcgtcgttttta 1423
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 722 cggcaatccttccaacttcaacaactctggcaacactcctaacaactctcgtcgatttta 781
Query: 1424 aaagacctcttgt 1436
|||||||||||||
Sbjct: 782 aaagacctcttgt 794
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 290,574
Number of extensions: 6496
Number of successful extensions: 6496
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6496
Number of HSP's successfully gapped: 1
Length of query: 1924
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1907
Effective length of database: 8,119,229
Effective search space: 15483369703
Effective search space used: 15483369703
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)