BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10976 (UTR included)
(4774 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059A1F12 139 5e-32
BF01062A1F03 90 4e-17
>BF01059A1F12
Length = 840
Score = 139 bits (70), Expect = 5e-32
Identities = 255/312 (81%), Gaps = 11/312 (3%)
Strand = Plus / Minus
Query: 4449 gagctttgcgtttgtgtgagtgtgcatagtcgtgtaggtatg--gtcaaatgtgtgcgtg 4506
||||||||| |||||||||||| || ||| ||||| || || |||||| ||||||||
Sbjct: 610 gagctttgcatttgtgtgagtgcacacagtagtgtatgtgtgatatcaaatttgtgcgtg 551
Query: 4507 ccacatgcttttacaggtttcaaccggtttatactgctttttcgccgcacttcacccttt 4566
|||| |||||| |||||| | ||||||||||||| |||| | || ||||||||||
Sbjct: 550 ccacgcgcttttctaggtttgatccggtttatactggttttactttgctcttcacccttc 491
Query: 4567 atactggtagctgagtgacgttattgagtacttagtattaagtttttgtgttctatttat 4626
|||||||||| || | || |||| ||| |||| ||| ||||| ||||| |||||||
Sbjct: 490 gtactggtagc--aggggcgctatttagtccttaatatgtagtttctgtgtcctatttac 433
Query: 4627 tcctgaaatggattctaacacaaataaacaaagcgtacttaaacatttaaaacaccaagt 4686
|||||||||||||||||||||||| |||| |||||||||| || ||| || ||||||
Sbjct: 432 tcctgaaatggattctaacacaaacaaacgaagcgtactt--accttttaattgccaagt 375
Query: 4687 aaaaaaa-attgtgtaatttaaa----tagttgttttaaagaaattaatgacataaaaat 4741
||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 374 aaaaaaatgttgtgtaatttaaatatgtagttattttaaagaaattaatgacataaaaac 315
Query: 4742 attaattgagga 4753
|| |||| ||||
Sbjct: 314 ataaatttagga 303
>BF01062A1F03
Length = 800
Score = 89.7 bits (45), Expect = 4e-17
Identities = 120/144 (83%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 4607 agtttttgtgttctatttattcctgaaatggattctaacacaaataaacaaagcgtactt 4666
||||||||||||| || | ||||||||||| |||||||||||||||||| |||| |||||
Sbjct: 433 agtttttgtgttccatatgttcctgaaatgtattctaacacaaataaacgaagcatactt 492
Query: 4667 aaacatttaaaacaccaagtaaaaaaaa--ttgtgtaatttaaatagttgttttaaagaa 4724
|||| ||| || ||| ||||| | ||| ||| ||||| ||||| ||| ||| |||||
Sbjct: 493 aaacctttgaataaccgagtaagagaaattttgcgtaatctaaatggttatttcaaagac 552
Query: 4725 attaatgacataaaaatattaatt 4748
||||||||| | ||||||| ||||
Sbjct: 553 attaatgacttgaaaatataaatt 576
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 511,081
Number of extensions: 9686
Number of successful extensions: 9686
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9685
Number of HSP's successfully gapped: 2
Length of query: 4774
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4756
Effective length of database: 8,109,745
Effective search space: 38569947220
Effective search space used: 38569947220
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)