BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10977 (UTR included)
(3708 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_913_C1 2214 0.0
>BF14_913_C1
Length = 1170
Score = 2214 bits (1117), Expect = 0.0
Identities = 1156/1170 (98%)
Strand = Plus / Plus
Query: 1319 aacgcggtcgcaaaactacaggagtccaccaaagtagacaagcaaatagaaaatgctgta 1378
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacgcggtcgcaaagctacaggagtccaccaaagtagacaagcaaatagaaaatgctgta 60
Query: 1379 tcgaaactgatggaagaaactagacaggagcatctcaaagaagaggagagaaagaataag 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 tcgaaactgatggaagaaactagacaggagcatctcaaagaagaggagagaaaaaataag 120
Query: 1439 gataaagaaaaaccagtcgctccaccaacgccatctataccgaaattaaaacagaaagtg 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gataaagaaaaaccagtcgctccaccaacgccatctataccgaaattaaaacagaaagtg 180
Query: 1499 aaactattaaaactccaagaactaactcgacccataccaaaggaaattaaagagaaactg 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaactattaaaactccaagaactaactcgacccataccaaaggaaattaaagagaaactg 240
Query: 1559 atgattcaagccgtggaaagaatattgcgagccgagaaagagagcgttatcgggggagcg 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgattcaagccgtggaaagaatattgcgagccgagaaagagagcgttatcgggggagcg 300
Query: 1619 gctcaaataaggacgaaattcatcacgatattcgcgtcaagttacactccggagatacga 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctcaaataaggacgaaattcatcacgatattcgcgtcaagttacactccggagatacga 360
Query: 1679 gaactggtcctcaactacatactggaagatccgttaaacagaatcgacctggcattatcc 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaactggtcctcaactacatactggaagatccgttaaacagaatcgacctggcattatcc 420
Query: 1739 tggctgtacgaagaatacgcgtacatgcaaggcttcaaccggcatccggtgacgctgcag 1798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggctgtacgaagaatacgcgtacatgcaaggcttcaaccggcatccggtgacgctgcag 480
Query: 1799 cccaaactgcacgaaaaacacggcgaaaactacaaccagctgctatgcgctctgatcacg 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 481 cccaaactgcacgaaaaacacggcgaaaactacaaccagctgctatgcgctctcatcacg 540
Query: 1859 cagatatcagagaggggggatccggtgatggaagggagtaaggacgtcctgctgaggaag 1918
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 541 cagatatcagagagaggggatccggtgatggaagggagtaaggacgttctgctgaggaag 600
Query: 1919 gtttactccgaagcgcccgtagtcaccgacgaggcggtggactacttgaagcatctggtc 1978
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 601 gtttactccgaagcgcccgtagtcaccgacgaggcagtggactacttgaagcatctggtc 660
Query: 1979 actgaggaaaagtcagcgacggtagccctggaactgctcgaggagttgtgtctgctaaga 2038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 actgaggaaaagtcagcgacggtagccctggaactgctcgaggagttgtgtctgctaaga 720
Query: 2039 ccacctagggcgcacaaatttgttgccgccctagtatgtcacgtgttgagtgaaaacgag 2098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccacctagggcgcacaaatttgttgccgccctagtatgtcacgtgttgagtgaaaacgag 780
Query: 2099 gaaattcgcaatatagccttgaaatcgtcaaccaaaatctacaaacacagtacggacgcc 2158
||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 781 gaaattcgcaatatagcgttgaaatcgtcgactaaaatctacaaacacagtacggacgcc 840
Query: 2159 gctaagaaggttatagagaaacacgctatgttgtacctcggctttatctcgctgtcaacg 2218
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 841 gctaagaaggttatagagaaacacgctatgttgtacctcggctttatctcgctatcaacg 900
Query: 2219 ccgccccaagagttgtatggcaacagacacgcgagcagaccctggtccgacgacttgtat 2278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ccgccccaagagttgtatggcaacagacacgcgagcagaccctggtccgacgacttgtat 960
Query: 2279 aaaatgtgcctcaatctggtcatggcgttgttcccagagaaggaagacgtgatcattgag 2338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aaaatgtgcctcaatctggtcatggcgttgttcccagagaaggaagacgtgatcattgag 1020
Query: 2339 atcgcccgcgtctacggaaccacaggcgctgaggcgaagcgctgtgtgctgcgacagctg 2398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 atcgcccgcgtctacggaaccacaggcgctgaggcgaagcgctgtgtgctgcgacagctg 1080
Query: 2399 gaagtgcctgtccgtgctctggccgcctcagagcctcctggacacctgtctcctgcgctc 2458
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1081 gaagtgcctgtgcgtgctctggccgcctcagnnnctcctggacacctgtctcctgcgctc 1140
Query: 2459 gcagcactgctggatgcgtgcccgcgcggc 2488
||||||||||||||||||||||||||||||
Sbjct: 1141 gcagcactgctggatgcgtgcccgcgcggc 1170
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 380,046
Number of extensions: 6771
Number of successful extensions: 6771
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6771
Number of HSP's successfully gapped: 1
Length of query: 3708
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3690
Effective length of database: 8,109,745
Effective search space: 29924959050
Effective search space used: 29924959050
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)