BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10985 (UTR included)
(1777 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040B2E01 1027 0.0
>BF01040B2E01
Length = 825
Score = 1027 bits (518), Expect = 0.0
Identities = 533/538 (99%)
Strand = Plus / Plus
Query: 1240 taacagattacatcctgaaagtcctctgtccgacataaactgatcacgacttagctaata 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taacagattacatcctgaaagtcctctgtccgacataaactgatcacgacttagctaata 60
Query: 1300 acaattataactacattttccatctatacatatatttgaaagtttcacacttattcaaat 1359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acaattataactacattttccatctatacatatatttgaaagtttcacacttattcaaat 120
Query: 1360 aatgttgccatttatttacttgaataccttgcaatataaaattgaaatcggtggatatta 1419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatgttgccatttatttacttgaataccttgcaatataaaattgaaatcggtggatatta 180
Query: 1420 attaaaagtgtagttataatataaattctatctaaaaacagtaaattcactacaaatcaa 1479
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 181 attaaaagtgtagttataacataaattcttactaaaaacagtaaattcactacaaatcaa 240
Query: 1480 catttaattttcagcacattttttaatcttataattgtttaattcaaataacatggggta 1539
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catttaattgtcagcacattttttaatcttataattgtttaattcaaataacatggggta 300
Query: 1540 gcttgagtcggtatgttttattataaaaaaattaccacagattaaaaaaattctctaagc 1599
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcttgagtcggtacgttttattataaaaaaattaccacagattaaaaaaattctctaagc 360
Query: 1600 ttacatatattgtgtgtaaaaatttatttgtctgtaatttaagtgaatattgccataatt 1659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttacatatattgtgtgtaaaaatttatttgtctgtaatttaagtgaatattgccataatt 420
Query: 1660 tctttgtaaaatccaatatctcggcgtattttttttttataatacttttgcataaatgaa 1719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tctttgtaaaatccaatatctcggcgtattttttttttataatacttttgcataaatgaa 480
Query: 1720 ctgtgatattgtattatggtagattgttaattattacttctttttaagataatctgtg 1777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgtgatattgtattatggtagattgttaattattacttctttttaagataatctgtg 538
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 281,137
Number of extensions: 7140
Number of successful extensions: 7140
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7140
Number of HSP's successfully gapped: 1
Length of query: 1777
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1760
Effective length of database: 8,119,229
Effective search space: 14289843040
Effective search space used: 14289843040
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)