BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10989 (UTR included)
(2374 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013B1E09 1550 0.0
BF01012A2D11 678 0.0
>BF01013B1E09
Length = 806
Score = 1550 bits (782), Expect = 0.0
Identities = 791/794 (99%)
Strand = Plus / Plus
Query: 400 gagattctacaaaagaaaacagatttttagtgaaaaaaataatgatgaaatgataaagtt 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gagattctacaaaagaaaacagatttttagtgaaaaaaataatgatgaaatgataaagtt 72
Query: 460 ttagctaataataaaactaataaatgtagtgaaagttaaagatgacttcagagtttatcc 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 ttagctaataataaaactaataaatgtagtgaaagttaaagatgacttcagagtttatcc 132
Query: 520 aaattaagaaagagccagtgtgtggcgaaacaccatcgtcccatgaaatcgtaaataatg 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 aaattaagaaagagccagtgtgtggcgaaacaccatcgtcccatgaaatcgtaaataatg 192
Query: 580 ttaataataaacaaattacagaaaatgtcggtgtctttgaacagaaaatagtaagtgttg 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ttaataataaacaaattacagaaaatgtcggtgtctttgaacagaaaatagtaagtgttg 252
Query: 640 aatttgtgaacattaaagtggagccgcgggacgatgttaaacatgagcccagcctgcttg 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aatttgtgaacattaaagtggagccgcgggacgatgttaaacatgagcccagcctgcttg 312
Query: 700 ttgagacctcaacatttcacaatacaaccattaaagaggaacccggttaccacaacatag 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ttgagacctcaacatttcacaatacaaccattaaagaggaacccggttaccacaacatag 372
Query: 760 acgtagaagtgtccattaaagaagagcccttggatagtgatcatgtggagtcgtccaact 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 acgtagaagtgtccattaaagaagagcccttggatagtgatcatgtggagtcgtccaact 432
Query: 820 tcagtgtgcccgagactgtgagaggtcccccatgtaatgtttatatcagtaatgtgtcgg 879
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 433 tcagtgtgcccgagactgtgagaggtcccccatgtaatgtttatatcagtaatgtgtcag 492
Query: 880 aggaggtgttgagtctgaactcgactgtggacggtaagtacatgtgtcccatatgttaca 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aggaggtgttgagtctgaactcgactgtggacggtaagtacatgtgtcccatatgttaca 552
Query: 940 agagattcgccaacaaaggtaatgttcagagacatgtggctctacactcgagggagaaat 999
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 553 agagattcgccaacaaaggtaatgttcagagacatgtggctctacactcgatggagaaat 612
Query: 1000 gggagtgtgaagtgtgctttagacagttcttcaagaagatgctgtatgagaagcacgtcc 1059
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gggagtgtgaagtgtgcttcagacagttcttcaagaagatgctgtatgagaagcacgtcc 672
Query: 1060 tgacgcattccacggagaagagattcaagtgtgaggagtgccagaagacgttcaggacgt 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tgacgcattccacggagaagagattcaagtgtgaggagtgccagaagacgttcaggacgt 732
Query: 1120 cctccaacctggagcagcacaagaggatacatctcacggtcaaacccttcgagtgtgaca 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 cctccaacctggagcagcacaagaggatacatctcacggtcaaacccttcgagtgtgaca 792
Query: 1180 cctgcaagcgacag 1193
||||||||||||||
Sbjct: 793 cctgcaagcgacag 806
>BF01012A2D11
Length = 759
Score = 678 bits (342), Expect = 0.0
Identities = 348/350 (99%)
Strand = Plus / Plus
Query: 873 gtgtcggaggaggtgttgagtctgaactcgactgtggacggtaagtacatgtgtcccata 932
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gtgtcagaggaggtgttgagtctgaactcgactgtggacggtaagtacatgtgtcccata 469
Query: 933 tgttacaagagattcgccaacaaaggtaatgttcagagacatgtggctctacactcgagg 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tgttacaagagattcgccaacaaaggtaatgttcagagacatgtggctctacactcgagg 529
Query: 993 gagaaatgggagtgtgaagtgtgctttagacagttcttcaagaagatgctgtatgagaag 1052
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 530 gagaaatgggagtgtgaagtgtgcttcagacagttcttcaagaagatgctgtatgagaag 589
Query: 1053 cacgtcctgacgcattccacggagaagagattcaagtgtgaggagtgccagaagacgttc 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 cacgtcctgacgcattccacggagaagagattcaagtgtgaggagtgccagaagacgttc 649
Query: 1113 aggacgtcctccaacctggagcagcacaagaggatacatctcacggtcaaacccttcgag 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 aggacgtcctccaacctggagcagcacaagaggatacatctcacggtcaaacccttcgag 709
Query: 1173 tgtgacacctgcaagcgacagttctccgtgagagcgaacttactgaagca 1222
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 tgtgacacctgcaagcgacagttctccgtgagagcgaacttactgaagca 759
Score = 412 bits (208), Expect = e-114
Identities = 214/216 (99%)
Strand = Plus / Plus
Query: 658 tggagccgcgggacgatgttaaacatgagcccagcctgcttgttgagacctcaacatttc 717
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tggagccgcgggacgatgttcaacatgagcccagcctgcttgttgagacctcaacatttc 69
Query: 718 acaatacaaccattaaagaggaacccggttaccacaacatagacgtagaagtgtccatta 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 acaatacaaccattaaagaggaacccggttaccacaacatagacgtagaagtgtccatta 129
Query: 778 aagaagagcccttggatagtgatcatgtggagtcgtccaacttcagtgtgcccgagactg 837
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 aagaagagcccttggataatgatcatgtggagtcgtccaacttcagtgtgcccgagactg 189
Query: 838 tgagaggtcccccatgtaatgtttatatcagtaatg 873
||||||||||||||||||||||||||||||||||||
Sbjct: 190 tgagaggtcccccatgtaatgtttatatcagtaatg 225
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 256,793
Number of extensions: 4910
Number of successful extensions: 4910
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4910
Number of HSP's successfully gapped: 3
Length of query: 2374
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2357
Effective length of database: 8,119,229
Effective search space: 19137022753
Effective search space used: 19137022753
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)