BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10994 (UTR included)
(3283 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2977_C1 1853 0.0
BF01015A2G12 1120 0.0
BF01029A1H04 280 1e-74
>BF14_2977_C1
Length = 1327
Score = 1853 bits (935), Expect = 0.0
Identities = 950/955 (99%)
Strand = Plus / Plus
Query: 460 gatcaaaatagtaaatagttataagcgaaaagtgctcaaaaatggaattcaattataaat 519
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatcaaactattaaatagttataagcgaaaagtgctcaaaaatggaattcaattataaat 60
Query: 520 ttaaaataattgtctcaatatttatttcatgtgctgtaataaaatctggagcctcattta 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaaaataattgtctcaatatttatttcatgtgctgtaataaaatctggagcctcattta 120
Query: 580 gtgatatctcaccgttacagaacgggacccaaaagaattttgtatacaataatacgttta 639
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagatatctcaccgttacagaacgggacccaaaagaattttgtatacaataatacgttta 180
Query: 640 tgtatgaccagacaattgatgtgatactcaatgatacaaccacacacatcctggacttcg 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtatgaccagacaattgatgtgatactcaatgatacaaccacacacatcctggacttcg 240
Query: 700 ttgagaagtcacctgagttgtcggtgtatccgacgagagtgcaagttagttcgaatgact 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgagaagtcacctgagttgtcggtgtatccgacgagagtgcaagttagttcgaatgact 300
Query: 760 ccttgacacccgagtatccggtgtttgtgacggccgcacagcagaaaggtgtatcttcct 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccttgacacccgagtatccggtgtttgtgacggccgcacagcagaaaggtgtatcttcct 360
Query: 820 gggagctgcctctcattgtgtccactagtcacgcaactcttcactttgacgagatggcgc 879
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 361 gggagctgcctctcattgtgtccactagtcacgcaactcttcactttgacgagatggctc 420
Query: 880 ggacactgtgcccacatgattcaggacccaatataacgtcacaaagccgaccgaccctga 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggacactgtgcccacatgattcaggacccaatataacgtcacaaagccgaccgaccctga 480
Query: 940 cgctgtccacgtcgagtccgaagaacttgtcagtcaggatcgagttacgacgagtccacg 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctgtccacgtcgagtccgaagaacttgtcagtcaggatcgagttacgacgagtccacg 540
Query: 1000 acttctacttggaagtcaacaaggaagtcaacttcagcgtcactcccagtacaccaaatt 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acttctacttggaagtcaacaaggaagtcaacttcagcgtcactcccagtacaccaaatt 600
Query: 1060 attattacttctcattcgaccgggatcctctaaacctgactcatggccagcactcgctac 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 attattacttctcattcgaccgggatcctctaaacctgactcatggccagcactcgctac 660
Query: 1120 gttttcccagatttaactatacgataccaaagagcgtgttactgatgatagattcggagg 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gttttcccagatttaactatacgataccaaagagcgtgttactgatgatagattcggagg 720
Query: 1180 acgatgtctgcgccgtcgtctctatacagaataattcttgtcccgtgttcgacaacgaag 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 acgatgtctgcgccgtcgtctctatacagaataattcttgtcccgtgttcgacaacgaag 780
Query: 1240 aggacgttcagtatcagggctaccacttcactatgacgacgcgcggcgggatcacagtta 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aggacgttcagtatcagggctaccacttcactatgacgacgcgcggcgggatcacagtta 840
Query: 1300 cccaatccatgttcccgcgaggtttctacgtagtgttcatagtgaaggagagcgatgagg 1359
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cccaatcgatgttcccgcgaggtttctacgtagtgttcatagtgaaggagagcgatgagg 900
Query: 1360 agtgtacaggagtacctgacaacgtccacgctgataagagaatcaagagatttag 1414
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 agtgtacaggagtacctgacaacgtccacgctgataagagaatcaagagatttag 955
Score = 696 bits (351), Expect = 0.0
Identities = 361/365 (98%)
Strand = Plus / Plus
Query: 1473 agattggtagccgtgccgtcagtgtcctactctgattatgtaacaggagctctggctgcg 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 agattggtagccgtgccgtcagtgtcctactctgattatgtaacaggagctctggctgcg 1013
Query: 1533 ctggcgctggtgatgctggtcgctctgctggcacctgtcgccaccgccctctcgtgtcgc 1592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 ctggcgctggtgatgctggtcgctctgctggcacctgtcgccaccgccctctcgtgtcgc 1073
Query: 1593 agcagtgaagtattaataatagaagacccactgccttccgggtccaggtccgacaccacc 1652
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1074 agcagtgaagtattaataatagaagacccactgccttccgggtccaggaccgacaccacc 1133
Query: 1653 gccagcgagacggcgccgatgtttaatagaagtgatgaatctgatctagagtctgagcct 1712
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1134 gccagcgagacggcgccgatgttcaatagaagtgatgaatctgatctagagtctgagcct 1193
Query: 1713 gaggtggaggtcgaggcgtctttgcctgtgccgctcaccctggccgggctcagtcgggcg 1772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1194 gaggtggaggtcgaggcgtctttgcctgtgccgctcaccctggccgggctcagtcgggcg 1253
Query: 1773 aagcctgtagcacatgacaggcgatccaacaggtacttctggagcgcgttgacggtagcg 1832
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1254 aagcctgtagcacatgacanncgatccaacaggtacttctggagcgcgttgacggtagcg 1313
Query: 1833 gtggt 1837
|||||
Sbjct: 1314 gtggt 1318
>BF01015A2G12
Length = 757
Score = 1120 bits (565), Expect = 0.0
Identities = 598/611 (97%)
Strand = Plus / Plus
Query: 1861 ccgggggggcggggagggaggcgctcggtataccgcaacaccgcggcctattatactcga 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ccgggggggcggggagggaggcgctcggtataccgcaacaccgcggcctattatactcga 206
Query: 1921 tggcgttggcgctcttcatggagggactcctctccgcctgctaccatctatgccccaata 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tggcgttggcgctcttcatggagggactcctctccgcctgctaccatctatgccccaata 266
Query: 1981 agatgaacttccagttcgactcgtcgttcatgtacgtgatagctgttctgtgcatcgtga 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 agatgaacttccagttcgactcgtcgttcatgtacgtgatagctgttctgtgcatcgtga 326
Query: 2041 agctgtaccagtcgcggcacccggatgtgaacgccagcgcgcacaccactttcatgctga 2100
||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 327 agctgtaccagtcgcggcacccggacgtgaacgcaagcgcgcacaccacgttcatgctga 386
Query: 2101 tagcgtgtctgatggctataggtctgttgggtatcatgtacccgagcctgtacttctggt 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tagcgtgtctgatggctataggtctgttgggtatcatgtacccgagcctgtacttctggt 446
Query: 2161 ggctgttcactgtgctgcacctcgccgcctgcttcttcctaacactcaatatatattacg 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ggctgttcactgtgctgcacctcgccgcctgcttcttcctaacactcaatatatattacg 506
Query: 2221 tcggcaagttgaagatggatcgctcgctgccgtatcaggcttggtcgggtctgaggactc 2280
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 507 tcggcaagttgaagatggatcgctcgctgccgtatcaggcttggtccggtctgaggactc 566
Query: 2281 acggctggtcgtcgtttagggtgaagtatcctgcgcgggcggctctcatagctgtggcga 2340
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 acggctggtcgtcgttcnnngtgaagtatcctgcgcgggcggctctcatagctgtggcga 626
Query: 2341 atgtggccaactgggcgctcgcgggatacgggctgtacgagcacaacaaggacttcgcgc 2400
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 627 atgtggccaactgggcgctcgcgggatacggtctgtacgagcacaacaaggacttcgcgc 686
Query: 2401 gccacctgctggcgatcctgatggggaacgcgatcctgtacacgctgggctacgtgttca 2460
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 687 gccacctgctggcgatcctcatnnngaacgcgatcctgtacacgctgggctacgtgttca 746
Query: 2461 tgaagctgctg 2471
|||||||||||
Sbjct: 747 tgaagctgctg 757
>BF01029A1H04
Length = 626
Score = 280 bits (141), Expect = 1e-74
Identities = 163/169 (96%), Gaps = 1/169 (0%)
Strand = Plus / Minus
Query: 3115 atatatatatatatttatattagtttataagcattatataacaaatcgatttaaaccacc 3174
|||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 590 atatttatatatatttatattagtttataagcattatataacaaatccatgtaaaccacc 531
Query: 3175 tgtgactccatccttcgccaacaacgctccctgtcgctgcaccatgctcgtggttcagga 3234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tgtgactccatccttcgccaacaacgctccctgtcgctgcaccatgctcgtggttcagga 471
Query: 3235 cttgaggacacggtaaaacgttgacgactttttgctatataatagataa 3283
||||||||||||||||| |||||||||| |||||||||| |||||||||
Sbjct: 470 cttgaggacacggtaaagcgttgacgaccttttgctata-aatagataa 423
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 371,587
Number of extensions: 12931
Number of successful extensions: 12931
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 12931
Number of HSP's successfully gapped: 4
Length of query: 3283
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3265
Effective length of database: 8,109,745
Effective search space: 26478317425
Effective search space used: 26478317425
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)