BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10995 (UTR included)
(6013 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01028A2A07 1314 0.0
BF01037B1H08 74 3e-12
>BF01028A2A07
Length = 746
Score = 1314 bits (663), Expect = 0.0
Identities = 700/711 (98%), Gaps = 1/711 (0%)
Strand = Plus / Plus
Query: 5304 cactgctcggccggcatagggcgcaccggctgcctcatcgccatactgaacggcatcaag 5363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cactgctcggccggcatagggcgcaccggctgcctcatcgccatactgaacggcatcaag 60
Query: 5364 cagctgacgagcgaggagaaggtggacgtgctgggtatcgtgtgtaacatgaggctcaac 5423
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 cagctgacgagcgaggagaaggtggacgtgctgggtatcgtgtgtaacatgagactcaac 120
Query: 5424 aggggcgggatggtgcagaactctgagcagtacgaactgatacataaagtgctctgcctc 5483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggggcgggatggtgcagaactctgagcagtacgaactgatacataaagtgctctgcctc 180
Query: 5484 tttgagcaggcctgcctgccacacttatagtcgtctcctaaacaatgtagggtagtcctt 5543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttgagcaggcctgcctgccacacttatagtcgtctcctaaacaatgtagggtagtcctt 240
Query: 5544 gaatatatttgtttgtttgtattggttcctgactaaatctaagcacataatatttaattt 5603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaatatatttgtttgtttgtattggttcctgactaaatctaagcacataatatttaattt 300
Query: 5604 attgttactataagcaaattcatagcaaaagctgacaattatgtttgtacattgaaagag 5663
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 301 attgttactataagcaaattcatagcaaaagctgacaattatgtttgtacattcaaagag 360
Query: 5664 atggttctgtgtaatatatgtaggtgtaactgaatgatgttctgcacttcccctattgat 5723
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 361 atggttctgtgtaatatatgtaggtgtaactgaatgatgttctacgcttcccctattgat 420
Query: 5724 gtagcttaagagattttctatggacatgtttatgacttgaagtattggcgacaccgatca 5783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtagcttaagagattttctatggacatgtttatgacttgaagtattggcgacaccgatca 480
Query: 5784 actattttatatggaatttacaaataacatatttaatttagaatcttaatgtttatgtga 5843
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 481 actattttatatggaatttacaaataacatatttaatttagaatattaatgtttatctga 540
Query: 5844 tggaattacttccatgccgtcttgtttgtctcctgagcggtgccagtgggctccccgaac 5903
|||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 541 tggaattacttccatgccatcttgtttgtctcatgagcggtgccagtgggctccccaaac 600
Query: 5904 cgagcgggcattgtcagtgagtgttgaggctcagtgttgca-gtctccgctgagagacaa 5962
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 601 cgagcgggcattgtcagtgagtgttgaggctcagtgttgcacgtctccgctgagagacaa 660
Query: 5963 cttgggattcatctataaatagcattatttatttaccttttagttcataag 6013
||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 661 cttgggattcatctataaatagcattatttatttaccttttagtttataag 711
>BF01037B1H08
Length = 758
Score = 73.8 bits (37), Expect = 3e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 445 ccaatgtgatcttttctgagtcatatgtacttactaataatatttagacaacactga 501
|||||||||||||||| ||||||||||||||| |||| ||||||||| || ||||||
Sbjct: 141 ccaatgtgatcttttccgagtcatatgtactttctaagaatatttagtcaccactga 197
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 100,286
Number of extensions: 15404
Number of successful extensions: 15404
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 15401
Number of HSP's successfully gapped: 2
Length of query: 6013
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5995
Effective length of database: 8,109,745
Effective search space: 48617921275
Effective search space used: 48617921275
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)