BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11000 (UTR included)
(1684 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2741_C1 852 0.0
BF01043A1D10 172 1e-42
>BF14_2741_C1
Length = 831
Score = 852 bits (430), Expect = 0.0
Identities = 430/430 (100%)
Strand = Plus / Plus
Query: 700 tggaatcccagctggtggacatctctccgcgggaggcagtgcgtcgtgtcggtgacgacc 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tggaatcccagctggtggacatctctccgcgggaggcagtgcgtcgtgtcggtgacgacc 401
Query: 760 tcacagtgttctgcaaggtgccctaccccatagactcctgtcgggtgacggtggggacga 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tcacagtgttctgcaaggtgccctaccccatagactcctgtcgggtgacggtggggacga 461
Query: 820 cgtcgtacagactcatcccgaacaaccaggaggaggaggtgacgtactccggccaggggt 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 cgtcgtacagactcatcccgaacaaccaggaggaggaggtgacgtactccggccaggggt 521
Query: 880 tggaggcgggcgagtgcggcgcgcacatcaaacacgtcagggaggagtggaacgggaaca 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tggaggcgggcgagtgcggcgcgcacatcaaacacgtcagggaggagtggaacgggaaca 581
Query: 940 tctcctgcacgctgccgccgcagaccggcagcatcgagctcagcgcctccatgaggctgc 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tctcctgcacgctgccgccgcagaccggcagcatcgagctcagcgcctccatgaggctgc 641
Query: 1000 tcgtggcgaaggcgcccggagtaccccagctggtgtctcctcctcagccgaccttccgcg 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tcgtggcgaaggcgcccggagtaccccagctggtgtctcctcctcagccgaccttccgcg 701
Query: 1060 agggtgacggtttcgtggcacagtgtatagtacctgacggacggcccgccgccaagatta 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 agggtgacggtttcgtggcacagtgtatagtacctgacggacggcccgccgccaagatta 761
Query: 1120 cttggtactt 1129
||||||||||
Sbjct: 762 cttggtactt 771
Score = 103 bits (52), Expect = 9e-22
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 1443 tgcagctgatggcgggtgttcatcagccggtagtgacgtcacgtccgggttc 1494
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tgcagctgatggcgggtgttcatcagccggtagtgacgtcacgtccgggttc 831
>BF01043A1D10
Length = 785
Score = 172 bits (87), Expect = 1e-42
Identities = 96/100 (96%)
Strand = Plus / Plus
Query: 1529 accctcaccccggacgacaacggcaagaagctggtgtgtcgtgccgagcacgaggcgctg 1588
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 1 accctcaccccggacgacaacggcaagaagctnnngtgtcgcgccgagcacgaggcgctg 60
Query: 1589 gactcgccgcgggaggtcgcccggcagctcgtggtcaact 1628
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gactcgccgcgggaggtcgcccggcagctcgtggtcaact 100
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 152,755
Number of extensions: 2997
Number of successful extensions: 2997
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2997
Number of HSP's successfully gapped: 3
Length of query: 1684
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1667
Effective length of database: 8,119,229
Effective search space: 13534754743
Effective search space used: 13534754743
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)