BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11001 (UTR included)
(1678 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043A1D10 718 0.0
BF14_2741_C1 240 6e-63
>BF01043A1D10
Length = 785
Score = 718 bits (362), Expect = 0.0
Identities = 374/379 (98%)
Strand = Plus / Plus
Query: 579 accctcaccccggacgacaacggcaagaagctggtgtgtcgtgccgagcacgaggcgctg 638
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 1 accctcaccccggacgacaacggcaagaagctnnngtgtcgcgccgagcacgaggcgctg 60
Query: 639 gactcgccgcgggaggtcgcccggcagctcgtggtcaactatccccccaagcgcctggag 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gactcgccgcgggaggtcgcccggcagctcgtggtcaactatccccccaagcgcctggag 120
Query: 699 gcgggccccatcaccatcttcggcctgaagttgggcgcggagggccgcctgaacgtgacg 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcgggccccatcaccatcttcggcctgaagttgggcgcggagggccgcctgaacgtgacg 180
Query: 759 gtgcgggcatcgccagccccgcgcgcccagtggacgctgggcgagctggtgctggaaccc 818
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 181 gtgcgggcatcgccagccccgcgcgcccagtggacgctgggtgagctggtgctggaaccc 240
Query: 819 ccgcggaccacggacggcgtgtccgccctggagccggtcgcgctcggcggcggctactat 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccgcggaccacggacggcgtgtccgccctggagccggtcgcgctcggcggcggctactat 300
Query: 879 aacatgaccctcgtgctggaacgagtgtccaaggacgacgtggcgcgctccatcggtctc 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacatgaccctcgtgctggaacgagtgtccaaggacgacgtggcgcgctccatcggtctc 360
Query: 939 cgggtcctcaacgagctgg 957
|||||||||||||||||||
Sbjct: 361 cgggtcctcaacgagctgg 379
>BF14_2741_C1
Length = 831
Score = 240 bits (121), Expect = 6e-63
Identities = 121/121 (100%)
Strand = Plus / Plus
Query: 59 aggcgcccggagtaccccagctggtgtctcctcctcagccgaccttccgcgagggtgacg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aggcgcccggagtaccccagctggtgtctcctcctcagccgaccttccgcgagggtgacg 710
Query: 119 gtttcgtggcacagtgtatagtacctgacggacggcccgccgccaagattacttggtact 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gtttcgtggcacagtgtatagtacctgacggacggcccgccgccaagattacttggtact 770
Query: 179 t 179
|
Sbjct: 771 t 771
Score = 103 bits (52), Expect = 9e-22
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 493 tgcagctgatggcgggtgttcatcagccggtagtgacgtcacgtccgggttc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tgcagctgatggcgggtgttcatcagccggtagtgacgtcacgtccgggttc 831
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 131,296
Number of extensions: 2188
Number of successful extensions: 2188
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2188
Number of HSP's successfully gapped: 3
Length of query: 1678
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1661
Effective length of database: 8,119,229
Effective search space: 13486039369
Effective search space used: 13486039369
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)