BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11009 (UTR included)
(2434 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01046A2G03 1550 0.0
>BF01046A2G03
Length = 793
Score = 1550 bits (782), Expect = 0.0
Identities = 792/794 (99%), Gaps = 1/794 (0%)
Strand = Plus / Plus
Query: 944 taatgatcatgctgattggaagagtttgtttgaaactattaaagaggctgacgctaatat 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taatgatcatgctgattggaagagtttgtttgaaactattaaagaggctgacgctaatat 60
Query: 1004 gaacacaaaacaccagggtcaagtcaaggttggggataagtggttatatgattcaaagta 1063
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaacacaaaacaccagggtcaagtcaaggttggggataagtggttatatgattcaaagt- 119
Query: 1064 ctacacatcaatacacactctagctacaaatgtagaaaagcgatctatttctgacatatt 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ctacacatcaatacacactctagctacaaatgtagaaaagcgatctatttctgacatatt 179
Query: 1124 tcagaaggcaatttcagctgctgtgtttttgaggtttctcaaattgaatacaacctttct 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tcagaaggcaatttcagctgctgtgtttttgaggtttctcaaattgaatacaacctttct 239
Query: 1184 ccagtgtgacaacaatgaagaacaggatgaaatttttaaatgtgtggcgggtctcttatt 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ccagtgtgacaacaatgaagaacaggatgaaatttttaaatgtgtggcgggtctcttatt 299
Query: 1244 gttacatctaatgacagttccaacaaacatgcatggtatatcaaccaatgttatgaatga 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gttacatctaatgacagttccaacaaacatgcatggtatatcaaccaatgttatgaatga 359
Query: 1304 aaatggtcttcttttaagtgatgttagtgtagccagcggtgcatatgcattcttgagttt 1363
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 360 aaatggtcttcttttaagtgatgttagcgtagccagcggtgcatatgcattcttgagttt 419
Query: 1364 gattaatcattcgtgtgctcccaatgttgttagatttagtaaagagggtgagggtattat 1423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gattaatcattcgtgtgctcccaatgttgttagatttagtaaagagggtgagggtattat 479
Query: 1424 gaccctttttgctctgcggcctatcaagaagggaatgcaaatatttgataattatgggtc 1483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gaccctttttgctctgcggcctatcaagaagggaatgcaaatatttgataattatgggtc 539
Query: 1484 gcatcacgctatggaagattacagtagtcggcaaagttctttgaagttccaatataaatt 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gcatcacgctatggaagattacagtagtcggcaaagttctttgaagttccaatataaatt 599
Query: 1544 tacttgtgtctgtgaggcatgcgtcgacaaatggcctacgtatgtgcaattgaatatgat 1603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tacttgtgtctgtgaggcatgcgtcgacaaatggcctacgtatgtgcaattgaatatgat 659
Query: 1604 gccaaccaaggacctgccagtgaaaatttgccaaaagaaaaagagcgttttgaaccagca 1663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gccaaccaaggacctgccagtgaaaatttgccaaaagaaaaagagcgttttgaaccagca 719
Query: 1664 tgcgatacgtcaattacaaaatggcgacgtctgtacagctctgaatatttataaggacct 1723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 tgcgatacgtcaattacaaaatggcgacgtctgtacagctctgaatatttataaggacct 779
Query: 1724 atgtgttttatgtg 1737
||||||||||||||
Sbjct: 780 atgtgttttatgtg 793
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 316,003
Number of extensions: 7066
Number of successful extensions: 7066
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7065
Number of HSP's successfully gapped: 1
Length of query: 2434
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2417
Effective length of database: 8,119,229
Effective search space: 19624176493
Effective search space used: 19624176493
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)