BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11023 (UTR included)
(1957 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059B2A03 912 0.0
BF14_1695_C1 82 4e-15
BF14_3240_C1 74 9e-13
BF14_2430_C1 74 9e-13
BF14_1645_C1 74 9e-13
>BF01059B2A03
Length = 611
Score = 912 bits (460), Expect = 0.0
Identities = 469/472 (99%)
Strand = Plus / Plus
Query: 561 ctgggcacttggaagtccaaacctggtgaagtgagtcaagcggtgaaagatgccatcgac 620
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 ctgggtacttggaagtccaaacctggtgaagtgagtcaagcggtgaaagatgccatcgac 199
Query: 621 atcggctacaggcacattgactgcgcctacgtgtacggcaacgagaaggaagtgggagac 680
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 200 atcggctacaggcacattgactgcgccttcgtgtacggcaacgagaaggaagtgggagac 259
Query: 681 gccatcacagagaagattaaggagggagttgtcaagagggaggagctgttcataacgtcc 740
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gccatcacagagaagattaaggagggagttgtcaagagggaggagctgttcataacgtca 319
Query: 741 aaactgtggaacaccttccaccgcccggacctggtgcgaggagcgctcatgaagagtctc 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaactgtggaacaccttccaccgcccggacctggtgcgaggagcgctcatgaagagtctc 379
Query: 801 cagaacctgaacttggactacttggatctgtacctcatacactggcctcaagcctataag 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cagaacctgaacttggactacttggatctgtacctcatacactggcctcaagcctataag 439
Query: 861 gaggacggagaattgttccccgtggacgagagcggtaagatccaattctctgatgtggac 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaggacggagaattgttccccgtggacgagagcggtaagatccaattctctgatgtggac 499
Query: 921 tacgtggacacctggaaggcgttggagccgctccaggccgagggactgattcggagcctc 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tacgtggacacctggaaggcgttggagccgctccaggccgagggactgattcggagcctc 559
Query: 981 ggagtgtccaacttcaactcgcgccagctggaccgagtgctggagtccgcca 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggagtgtccaacttcaactcgcgccagctggaccgagtgctggagtccgcca 611
>BF14_1695_C1
Length = 1407
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 1768 tacacgacactggcagaatgtactgagcacgtctctgcacggatgaaggccatattaaaa 1827
|||| |||||||||||||| ||||| |||||||| |||||||||||| ||||||||| ||
Sbjct: 1183 tacatgacactggcagaatatactgtgcacgtctttgcacggatgaatgccatattataa 1242
Query: 1828 aaaaa 1832
|||||
Sbjct: 1243 aaaaa 1247
>BF14_3240_C1
Length = 2110
Score = 73.8 bits (37), Expect = 9e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 1768 tacacgacactggcagaatgtactgagcacgtctctgcacggatgaaggccatatta 1824
|||||| ||||||| |||| ||||| |||| ||||||||||||||||||||||||||
Sbjct: 1618 tacacggcactggcggaatatactgtgcacttctctgcacggatgaaggccatatta 1674
>BF14_2430_C1
Length = 830
Score = 73.8 bits (37), Expect = 9e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 1768 tacacgacactggcagaatgtactgagcacgtctctgcacggatgaaggccatattaaaa 1827
||||||||||||||||||| ||||| |||| ||| |||||| |||||||||||||| |||
Sbjct: 176 tacacgacactggcagaatatactgtgcacatctttgcacgtatgaaggccatatttaaa 235
Query: 1828 a 1828
|
Sbjct: 236 a 236
>BF14_1645_C1
Length = 793
Score = 73.8 bits (37), Expect = 9e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1768 tacacgacactggcagaatgtactgagcacgtctctgcacggatgaaggccatattaaaa 1827
||||||||||||||||||| ||||| |||||||| |||||| ||||||||||| || ||
Sbjct: 126 tacacgacactggcagaatatactgtgcacgtcttggcacgggtgaaggccataatataa 185
Query: 1828 aaaaa 1832
|||||
Sbjct: 186 aaaaa 190
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 207,001
Number of extensions: 4030
Number of successful extensions: 4030
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 4030
Number of HSP's successfully gapped: 5
Length of query: 1957
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1940
Effective length of database: 8,119,229
Effective search space: 15751304260
Effective search space used: 15751304260
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)