BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11025 (UTR included)
(2038 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054A1C04 981 0.0
BF14_1037_C1 466 e-131
>BF01054A1C04
Length = 797
Score = 981 bits (495), Expect = 0.0
Identities = 539/557 (96%), Gaps = 15/557 (2%)
Strand = Plus / Plus
Query: 476 gctcgctgctccgtcagtactaaatatggcagtgatggcctcgttcgtgtccgtggcggt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctcgctgctccgtcagtactaaatatggcagtgatggcctcgttcgtgtccgtggcggt 60
Query: 536 gtctatcctctacacgccggttctgctgttgattctctgtgtgatcttcctggcttccat 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtctatcctctacacgccggttctgctgttgattctctgtgtgatcttcctggcttccat 120
Query: 596 cggcaaatctctcggcgtgagacgtctttacgtcaatatattgctgaaattgttcgagta 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cggcaaatctctcggcgtgagacgtctttacgtcaatatattgctgaaattgttcgagta 180
Query: 656 tggaagacagcacatcgaggtggcgaaaaagttacagaggtcagatagttctgatgagga 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggaagacagcacatcgaggtggcgaaaaagttacagaggtcagatagttctgatgagga 240
Query: 716 ggatcatccaggggccggggatgagaaaccgccttccgccctcgtcaaggagaatggagt 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggatcatccaggggccggggatgagaaaccgccttccgccctcgtcaaggagaatggagt 300
Query: 776 caacggtaccaagatgagtgtgatagagaggcaggagatcctagggccctcgccggagct 835
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taacggtaccaagatgagtgtgatagagaggcaggagatcctagggccctcgccggagct 360
Query: 836 gaactacaagaggagtcacagccaggagaggatttccaacggatataaggtcctcaaagc 895
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaactacaagaggagtcacagccaggagaggatttccaacggatata------------- 407
Query: 896 ggagaacgagctggagttccacgtggaccactgtatggacctgatgaaggcgggcgtgga 955
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 408 --agaacgagctggagttccacgtggaccactgtatggacctgatgaaggcgggtgtgga 465
Query: 956 ggccatcatcgaggaccaggtcacgtccgtgttcgaggccgaggagctgcgcagctggaa 1015
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ggccattatcgaggaccaggtcacgtccgtgttcgaggccgaggagctgcgcagctggaa 525
Query: 1016 cctcctcaccaggacta 1032
|||||||||||||||||
Sbjct: 526 cctcctcaccaggacta 542
Score = 216 bits (109), Expect = 1e-55
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 1153 gacagtacgagttcctgacgtggcgcctcaccatcatctgggcgatgggcttcgtggtga 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gacagtacgagttcctgacgtggcgcctcaccatcatctgggcgatgggcttcgtggtga 605
Query: 1213 ggtacctgttcctgctgccgctcaggatactcatcttcatcatcggggt 1261
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ggtacctgttcctgctgccgctcaggatactcatcttcatcatcggggt 654
>BF14_1037_C1
Length = 1180
Score = 466 bits (235), Expect = e-131
Identities = 235/235 (100%)
Strand = Plus / Plus
Query: 1719 ggtgtggtggctgttggcgtgcaccgccgccgtgggctgtctgccggacgggcgggtgaa 1778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 ggtgtggtggctgttggcgtgcaccgccgccgtgggctgtctgccggacgggcgggtgaa 126
Query: 1779 gcagcgcgtgaacagtacgctgtccctgatgtgcttcaacttcctgtcccgctgcatcag 1838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gcagcgcgtgaacagtacgctgtccctgatgtgcttcaacttcctgtcccgctgcatcag 186
Query: 1839 cgccgtggtgacctaccacagcccggagctgcggcctcgctccggcatctgcgtggcgaa 1898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 cgccgtggtgacctaccacagcccggagctgcggcctcgctccggcatctgcgtggcgaa 246
Query: 1899 ccacaccagccccatcgacgtgctggtgctcatgtgtgacagtcgctactcgctg 1953
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ccacaccagccccatcgacgtgctggtgctcatgtgtgacagtcgctactcgctg 301
Score = 137 bits (69), Expect = 8e-32
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1193 ggcgatgggcttcgtggtgaggtacctgttcctgctgccgctcaggatactcatcttcat 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcgatgggcttcgtggtgaggtacctgttcctgctgccgctcaggatactcatcttcat 60
Query: 1253 catcggggt 1261
|||||||||
Sbjct: 61 catcggggt 69
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 208,647
Number of extensions: 5372
Number of successful extensions: 5372
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5372
Number of HSP's successfully gapped: 5
Length of query: 2038
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2021
Effective length of database: 8,119,229
Effective search space: 16408961809
Effective search space used: 16408961809
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)