BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11044 (UTR included)
(1189 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_447_C1 920 0.0
>BF14_447_C1
Length = 1383
Score = 920 bits (464), Expect = 0.0
Identities = 473/476 (99%)
Strand = Plus / Minus
Query: 714 tgcaaccaaataaccaaaacgtaccagctggcccgatggctactaagatattgtggaatg 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1383 tgcaaccaaataaccaaaacgtaccagctggcccgatggctactaagatattgtggaatg 1324
Query: 774 tttttgtaacagcaaaagtgcataaccaattaaaagcagtaatcatagacgcggctccac 833
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 1323 tttttgtaacagcaaaagtgcataaccaattaaaaccagtaatcatagacgcggcgccac 1264
Query: 834 ctctaatttttgctggtaaaatttcccccatcattaaccaaggtatcggcccgaaagcca 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1263 ctctaatttttgctggtaaaatttcccccatcattaaccaaggtatcggcccgaaagcca 1204
Query: 894 aagaaaatccaagtaaataaaacatcacacttgtcagcggaagccaacctaagttggtga 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 aagaaaatccaagtaaataaaacatcacacttgtcagcggaagccaacctaagttggtga 1144
Query: 954 cattcatatgtaatgtgtctcgaacgtaaaagaacgttcctagcactatgagcgtcacgg 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 cattcatatgtaatgtgtctcgaacgtaaaagaacgttcctagcactatgagcgtcacgg 1084
Query: 1014 tcattgttaccgaagaaatgtaaagtagtattttgcgtcctgttctgtctatgagagcag 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 tcattgttaccgaagaaatgtaaagtagtattttgcgtcctgttctgtctatgagagcag 1024
Query: 1074 ttgctacgaatgttgagatgaaattgactaatccgacaataattgttgataaattaccat 1133
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 ttgctatgaatgttgagatgaaattgactaatccgacaataattgttgataaattaccat 964
Query: 1134 ctacggaactgcctgacatgttgaatattttgactgtgtagaatatcacggcgtta 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 ctacggaactgcctgacatgttgaatattttgactgtgtagaatatcacggcgtta 908
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 164,423
Number of extensions: 3609
Number of successful extensions: 3609
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3609
Number of HSP's successfully gapped: 1
Length of query: 1189
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1172
Effective length of database: 8,119,229
Effective search space: 9515736388
Effective search space used: 9515736388
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)