BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11048 (UTR included)
(1672 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005B2A04 1271 0.0
>BF01005B2A04
Length = 689
Score = 1271 bits (641), Expect = 0.0
Identities = 650/653 (99%)
Strand = Plus / Plus
Query: 426 caaagctaatggtaataagtttatgaaaatatggctttttacacctgtaaccgatataga 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 caaagctaatggtaataagtttatgaaaatatggctttttacacctgtaaccgatataga 96
Query: 486 ttgatagttttaataatgttggcactgattatgtggcaaggcttcaggttgtttttagta 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 ttgatagttttaataatgttggcactgattatgtggcaaggcttcaggttgtttttagta 156
Query: 546 gataaaccaaaacctcatgtaatagaggatacctcactgaatatattacggttagaagat 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 gataaaccaaaacctcatgtaatagaggatacctcactgaatatattacggttagaagat 216
Query: 606 gacaaatacaacatacacaaacaagacaagattaaaataagagtttattatgaagccctg 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gacaaatacaacatacacaaacaagacaagattaaaataagagtttattatgaagccctg 276
Query: 666 tgcccagactcaaaacatttcttcataaggcatttgtggccagtaacagaaaagttatca 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tgcccagactcaaaacatttcttcataaggcatttgtggccagtaacagaaaagttatca 336
Query: 726 gattttatagaagtttttttggtgccatacggcaaagctagtaccaaagaagaaaatggc 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gattttatagaagtttttttggtgccatacggcaaagctagtaccaaagaagaaaatggc 396
Query: 786 cactactttttccaatgtcagcacggcgaacaagagtgctatgctaacaaggttcatgca 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cactactttttccaatgtcagcacggcgaacaagagtgctatgctaacaaggttcatgca 456
Query: 846 tgtgcaattgatgtacttaataatccgatgatggctgtcaaacttgcccagtgtatgata 905
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 457 tgtgcaattgatgtacttaataatccgatgatggcagtcaaacttgcccagtgtatgata 516
Query: 906 actgacaatatggatgctgatgaggctttggctaggtgtgcaaaaccgatgaatgtagat 965
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 517 actgacaatatggatgctgatgaggctttagctaggtgtgcaaaaccgatgaatgtagat 576
Query: 966 ccagagccaatcacaaattgcgctttgagtgctcacggttcagctctcctgaagaagcat 1025
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ccggagccaatcacaaattgcgctttgagtgctcacggttcagctctcctgaagaagcat 636
Query: 1026 ggtgacgacacagatatgatcaaaccaacatttataccgaccattacaatgaa 1078
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ggtgacgacacagatatgatcaaaccaacatttataccgaccattacaatgaa 689
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 294,097
Number of extensions: 8709
Number of successful extensions: 8709
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8709
Number of HSP's successfully gapped: 1
Length of query: 1672
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1655
Effective length of database: 8,119,229
Effective search space: 13437323995
Effective search space used: 13437323995
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)