BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11057 (UTR included)
(3457 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2876_C1 1901 0.0
BF01021B1F02 129 3e-29
>BF14_2876_C1
Length = 1013
Score = 1901 bits (959), Expect = 0.0
Identities = 962/963 (99%)
Strand = Plus / Plus
Query: 387 cggcgggtttattttgtttataacttgtacatgtagaagacaaaaataagagacatatta 446
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 cggcgggtttattttgtttataacttgtacatgtagaagacaaaaataaaagacatatta 60
Query: 447 tatacattataataactactattatgaaataattttagttacaaacaataaagaatgact 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tatacattataataactactattatgaaataattttagttacaaacaataaagaatgact 120
Query: 507 tctattattaaattccattgcctctcaggggctggagacgagtctcctccctgctacgtg 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctattattaaattccattgcctctcaggggctggagacgagtctcctccctgctacgtg 180
Query: 567 ttgcaagtggatgaatttaaattcctcttggactgtggatgggatgaaaaatttgatatg 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgcaagtggatgaatttaaattcctcttggactgtggatgggatgaaaaatttgatatg 240
Query: 627 gattttataaaggaacttaaaagacatgtcaactctatagatgcagtcctactgtcacat 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gattttataaaggaacttaaaagacatgtcaactctatagatgcagtcctactgtcacat 300
Query: 687 tcagatccccttcatctcggggccctaccatatgctgtcggacagctcggtttaaactgt 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcagatccccttcatctcggggccctaccatatgctgtcggacagctcggtttaaactgt 360
Query: 747 cctatatatgccaccctcccaatatacaagatgggccaaatgttcatgtatgatctctac 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cctatatatgccaccctcccaatatacaagatgggccaaatgttcatgtatgatctctac 420
Query: 807 caatcacataaaaatgtctccgagtttgatctgttcacattagatgatgtggacacagca 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caatcacataaaaatgtctccgagtttgatctgttcacattagatgatgtggacacagca 480
Query: 867 tttgatagaatcacacaacttaaatataatcagagtgttgatatgaagggtaaagggcta 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttgatagaatcacacaacttaaatataatcagagtgttgatatgaagggtaaagggcta 540
Query: 927 ggcctgcgtataactccactgccagccggacacctcctgggcggaactgtgtggcgtatt 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggcctgcgtataactccactgccagccggacacctcctgggcggaactgtgtggcgtatt 600
Query: 987 gcagccccaggggaagaagacatagtgtacgcaccagacttcaaccacaaaaaggagcgg 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcagccccaggggaagaagacatagtgtacgcaccagacttcaaccacaaaaaggagcgg 660
Query: 1047 catctgaatgggtgcgagattgagaagattatgaggccttcattactgctgctcggagct 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 catctgaatgggtgcgagattgagaagattatgaggccttcattactgctgctcggagct 720
Query: 1107 atgaatgctgattacgtgcagcagagacggcggctaagggacgaaaaacttatgacaaca 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atgaatgctgattacgtgcagcagagacggcggctaagggacgaaaaacttatgacaaca 780
Query: 1167 atccttagtacacttcggggtggtggttcagtactggtgtgtacggacaccgcgggacgg 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 atccttagtacacttcggggtggtggttcagtactggtgtgtacggacaccgcgggacgg 840
Query: 1227 gttctagagctggcccatatgttggaccaactttggaggaacaaggattctggtcttgtt 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gttctagagctggcccatatgttggaccaactttggaggaacaaggattctggtcttgtt 900
Query: 1287 gcatattctctgttgttgttgtccaacgtcagctataatgttgtggagtttgccaagtca 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gcatattctctgttgttgttgtccaacgtcagctataatgttgtggagtttgccaagtca 960
Query: 1347 cag 1349
|||
Sbjct: 961 cag 963
Score = 103 bits (52), Expect = 2e-21
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 1388 aggagctagaagcaaccctttcgcgctgaggcacttgcaactgtgtcactcc 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 aggagctagaagcaaccctttcgcgctgaggcacttgcaactgtgtcactcc 1013
>BF01021B1F02
Length = 757
Score = 129 bits (65), Expect = 3e-29
Identities = 83/88 (94%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 2753 gcgcacaaaacacaccgacgcgagtctgctcactgacggggagccaaacagatcgcgtct 2812
||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 757 gcgcacaaaacacgccgacgcgangctgctcactgacggggagccaaacagatcgcgtct 698
Query: 2813 cgatggaaccgcgagcctcgcctcaaca 2840
|||| ||||||| |||||||||||||||
Sbjct: 697 cgattgaaccgc-agcctcgcctcaaca 671
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 303,894
Number of extensions: 4976
Number of successful extensions: 4976
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4975
Number of HSP's successfully gapped: 3
Length of query: 3457
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3439
Effective length of database: 8,109,745
Effective search space: 27889413055
Effective search space used: 27889413055
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)