BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11058 (UTR included)
(1558 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1457_C1 1616 0.0
>BF14_1457_C1
Length = 844
Score = 1616 bits (815), Expect = 0.0
Identities = 836/843 (99%)
Strand = Plus / Plus
Query: 286 tgtaaatttttcagaagcacagcgccgacgtttctaatttttcgggccaactcatcggtt 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgtaaatttttcagaagcacagcgccgacgtttctaatttttcgggccaactcatcggtt 61
Query: 346 ctttgacacagaataatatgtttgtttttacatcgagaagtaatgatttctgactaacta 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctttgacacagaataatatgtttgtttttacatcgagaagtaatgatttctgactaacta 121
Query: 406 ctaattaattaataaataaaggagaacaattaaaaatggaggtccaatatctctttcttt 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctaattaattaataaataaaggagaacaattaaaaatggaggtccaatatctctttcttt 181
Query: 466 tactatgtgttttttggaacggttgcaatgctattatgtggagtttagcaccaaacacac 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tactatgtgttttttggaacggttgcaatgctattatgtggagtttagcaccaaacacac 241
Query: 526 aaaagtgtttaaaagaagaactacacgctaatgtgcttgtagctggtgaatatgaggtta 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaaagtgtttaaaagaagaactacacgctaatgtgcttgtagctggtgaatatgaggtta 301
Query: 586 ccgaagctgctgggcaacgaattgattacattgtccgtgactcaaaaggtcacatacttg 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ccgaagctgctgggcaacgaattgattacattgtccgtgactcaaaaggtcacatacttg 361
Query: 646 ctcagaaagatggcatcaccaagggaaaattcacttttgtaacagagacatatgatacat 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctcagaaagatggcatcaccaagggaaaattcacttttgtaacagagacatatgatacat 421
Query: 706 ttgaagtctgtttcatttcaaaagtgcctcaagaacgtcgcggtgttgcccaagaagtga 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttgaagtctgtttcatttcaaaagtgcctcaagaacgtcgcggtgttgcccaagaagtga 481
Query: 766 cattggacatcaaagttggcattgaagcaaagaactatgaaggcatcggggaggctgcga 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 482 cattggacatcaaagttggcattgaagcaaagaactatgaaggcatcggggaggcggcga 541
Query: 826 aattaaaaccgatggagctcgagttgaagaggttagaagatttatcagaagctattgtac 885
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 542 aattaaaaccgatggagcttgagttgaagagattagaagatttatcagaagctattgtac 601
Query: 886 aggacttcactcttatgaggaagagggaggaagaaatgagagatactaatgagtctacaa 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aggacttcactcttatgaggaagagggaggaagaaatgagagatactaatgagtctacaa 661
Query: 946 acaatcgtgtgctatttttcagtatattttcaatggtgtgcctcttagggctggccacat 1005
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 662 acaatcgtgtgctatttttcagtatattttcaatggtgtgcctcttagggttggccacat 721
Query: 1006 ggcaggtgttgtatctacgtagatacttcaaagccaaaaaacttattgaataaacttttt 1065
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ggcaagtgttgtatctacgtagatacttcaaagccaaaaaacttattgaataaacttttt 781
Query: 1066 atatacttattaatagatataatcacactgagtgtatcatgttatactggttgttgttta 1125
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 782 atatatttattaatagatataatcacactgagtgtatcatgttatactggttgttgttaa 841
Query: 1126 tgt 1128
|||
Sbjct: 842 tgt 844
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 281,712
Number of extensions: 20523
Number of successful extensions: 20523
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 20523
Number of HSP's successfully gapped: 1
Length of query: 1558
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1541
Effective length of database: 8,119,229
Effective search space: 12511731889
Effective search space used: 12511731889
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)