BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11065 (UTR included)
(5317 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042B2E02 1417 0.0
>BF01042B2E02
Length = 767
Score = 1417 bits (715), Expect = 0.0
Identities = 754/767 (98%)
Strand = Plus / Plus
Query: 2785 ctaatatatttaaaacggatgctttaacgaaagtaccggatattttgttctatgatgtgc 2844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctaatatatttaaaacggatgctttaacgaaagtaccggatattttgttctatgatgtgc 60
Query: 2845 ctcagcatatcagactattggagtggttattgcaagatttcctattaggaaaccacttgt 2904
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcagcatataagactattggagtggttattgcaagatttcctattaggaaaccacttgt 120
Query: 2905 tgctcgttggcaaccaaggtgtcgggaagaacaaaattgcagatagacttttacaactat 2964
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgctggttggcaaccaaggtgtcgggaagaacaaaattgcagatagacttttacaactat 180
Query: 2965 tgaatcgtccaagagaatatattcaactccacagagacacgacggttcaatcattaacag 3024
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 181 tgaatcgtccaagagaatatattcagctccacagagacacaacggttcaatcattaacag 240
Query: 3025 tgcaacccactgttcaagatggcgtcgttatatacgaagattcgcccttagttaaagctg 3084
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 241 tgcaacccactgttcaagatggcgtcgttatatatgaagattcgcccttagttaaagctg 300
Query: 3085 ttaaatatggccatgttttggttgtggatgaggcggataaggcaccaacacatgtgacat 3144
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttaaatatggtcatgttttggttgtggatgaggcggataaggcaccaacacatgtgacat 360
Query: 3145 gtattttgaaaactttagttgaaaatggggagatgatactgagcgatggtaggagaatag 3204
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 361 gtattttgaaaactttagttgaaaatggggagatgatactgagcgatggtagaagaatag 420
Query: 3205 tccctaaacacatgttggagagttcgggaggagatctgtctagttttattcccgttcatg 3264
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 421 tccctaaacacatgttggagagttcgggaggagatctggctagttttattcccgtgcatg 480
Query: 3265 atgactttagaatgatcgtgctagcgaacagaccaggttttccgtttttgggaaatgatt 3324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgactttagaatgatcgtgctagcgaacagaccaggttttccgtttttgggaaatgatt 540
Query: 3325 tctttgcttcattgggtgatctattctcttgtcacgcggtcgataatccatcaatagaat 3384
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctttgcttcattgggtgacctattctcttgtcacgcggtcgataatccatcaatagaat 600
Query: 3385 cagaattagaacttctacgtgcttacggaccggatgttcctaaggatgtcatgaaaaaac 3444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cagaattagaacttctacgtgcttacggaccggatgttcctaaggatgtcatgaaaaaac 660
Query: 3445 tggttcaagccttcgcattactcagagatatggctgaccaaggacaactaacatacccat 3504
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 661 tggttcaagcctttgcattactcagagatatggctgaccaaggacaacttacatacccat 720
Query: 3505 attctactagagaactagttaatattgttaaacatttgcagaaatac 3551
||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 721 attctactagagaactagttaatattgttaaacatttacagaaatac 767
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 544,597
Number of extensions: 9771
Number of successful extensions: 9771
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9771
Number of HSP's successfully gapped: 1
Length of query: 5317
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5299
Effective length of database: 8,109,745
Effective search space: 42973538755
Effective search space used: 42973538755
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)