BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11067 (UTR included)
(4951 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060A1H05 1520 0.0
BF01022B1E12 226 3e-58
>BF01060A1H05
Length = 797
Score = 1520 bits (767), Expect = 0.0
Identities = 773/775 (99%)
Strand = Plus / Plus
Query: 1104 gatgaaacaagtgaaatgaagaatcaaaacacacctgaaatatttacagcaactatatca 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgaaacaagtgaaatgaagaatcaaaacacacctgaaatatttacagcaactatatca 60
Query: 1164 gcagccaacaaagttgattcacccagtacacctagattggaatctatgcagaggataagt 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcagccaacaaagttgattcacccagtacacctagattggaatctatgcagaggataagt 120
Query: 1224 ccatcacctacaaatcaaagggcttcatcacctcctcatatggaacatccttccaataca 1283
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccatcacctacaaatcaaagggcttcatcacctcctcatatggaacatccttccaatacg 180
Query: 1284 aatactgaacctatatcgcctgcaaacacacaagaaatgaaaacccaagaatctgatagt 1343
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aataccgaacctatatcgcctgcaaacacacaagaaatgaaaacccaagaatctgatagt 240
Query: 1344 gaagataaacaacctacagacttaaaaacccaacaaatatctaaacatgatggccaaaat 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaagataaacaacctacagacttaaaaacccaacaaatatctaaacatgatggccaaaat 300
Query: 1404 cttcggcaaccactattcgctccgcctgtacgtcctgaaaatcttggtgtaagatctacc 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttcggcaaccactattcgctccgcctgtacgtcctgaaaatcttggtgtaagatctacc 360
Query: 1464 gaagcctcaaatacaccagtttcaattcaaaatatgcctccaccacccttgagtcaacca 1523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaagcctcaaatacaccagtttcaattcaaaatatgcctccaccacccttgagtcaacca 420
Query: 1524 tctatgacagggcttttacctccaggaccacttatatcagtaggaggcgggtctaatgtg 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tctatgacagggcttttacctccaggaccacttatatcagtaggaggcgggtctaatgtg 480
Query: 1584 gggccttatggattcatgccttccgcattgtacggccatcctggacatcctgggcatcca 1643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gggccttatggattcatgccttccgcattgtacggccatcctggacatcctgggcatcca 540
Query: 1644 ggattagataagcctggatcaatgccgcctttaatgcaacaagttccaccatcacataat 1703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggattagataagcctggatcaatgccgcctttaatgcaacaagttccaccatcacataat 600
Query: 1704 cactctgctacaagtcttattgcccaacaatcaaatcaaaatgactcatctatgccacaa 1763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cactctgctacaagtcttattgcccaacaatcaaatcaaaatgactcatctatgccacaa 660
Query: 1764 gatcttaaaatcaagcaagaagttccagataatatgccagctaatctgtcaacacaaaat 1823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gatcttaaaatcaagcaagaagttccagataatatgccagctaatctgtcaacacaaaat 720
Query: 1824 gtgtctgatcctttacaatcactaaaagaagttaaagtgcctggataccctatag 1878
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtgtctgatcctttacaatcactaaaagaagttaaagtgcctggataccctatag 775
>BF01022B1E12
Length = 675
Score = 226 bits (114), Expect = 3e-58
Identities = 122/125 (97%)
Strand = Plus / Plus
Query: 1 ctcgctcaatggcagcgtttgccggtatgtgtgatggaggatctccagatgatggctgtg 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 551 ctcgctcaatggcagcgtttgccggtatgtgtgatggaggatccccagatgatggctgtg 610
Query: 61 tagcagccagccgtgatgatacaactatcaatgctttagatgttcttcacgattcaggtt 120
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 611 tagcagccagccgtgatgatacaactatcaatgctttagntgttcttcacgactcaggtt 670
Query: 121 atgat 125
|||||
Sbjct: 671 atgat 675
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 481,082
Number of extensions: 9793
Number of successful extensions: 9793
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9793
Number of HSP's successfully gapped: 2
Length of query: 4951
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4933
Effective length of database: 8,109,745
Effective search space: 40005372085
Effective search space used: 40005372085
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)