BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11071 (UTR included)
(1732 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_379_C1 1461 0.0
>BF14_379_C1
Length = 776
Score = 1461 bits (737), Expect = 0.0
Identities = 759/765 (99%), Gaps = 1/765 (0%)
Strand = Plus / Plus
Query: 447 ggttgttcgcgaacagggattcgcaatattaaggagtaaatattataaataaaaatgtta 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ggttgttcgcgaacagggattcgcaatattaaggagtaaatattataaataaaaatgtta 71
Query: 507 tccagcttaaggtctggagtgaagggcttgtggaggacatcagcaagaagtcttcaaaca 566
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 72 tccagcttaaggtctggagtgaagggcttgtggaggacatcagcaagaactcttcaaaca 131
Query: 567 acagcaaaattgcagcatgatagtttatttgtgcaccgtgactcacccgaggacaaccct 626
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 132 acagcaaaattgcagcatgatagtttatttgtgcaccgtgacacacccgaggacaaccct 191
Query: 627 agtataccctttgaatttacgcctgaaaaccaaaagcgagctgatgctcttctagaaatt 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 agtataccctttgaatttacgcctgaaaaccaaaagcgagctgatgctcttctagaaatt 251
Query: 687 tatcccgagggccacaagagggcagcaatgatcccgcttttggatcttgctcagcgtcag 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tatcccgagggccacaagagggcagcaatgatcccgcttttggatcttgctcagcgtcag 311
Query: 747 aatggtggctggctaccaatatcagccatgcataaggttgctgaactactgaacctacct 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aatggtggctggctaccaatatcagccatgcataaggttgctgaactactgaacctacct 371
Query: 807 cgtatgagagtgtatgaagttgccaccttttacaccatgtttataaggcgtccaattggt 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cgtatgagagtgtatgaagttgccaccttttacaccatgtttataaggcgtccaattggt 431
Query: 867 aaatatcatattcaagtgtgcacaactacaccatgttggttaaggggttctgatacagtg 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 432 aaatatcatattcaagtgtgcacaactacaccatgttggttaaggggttctgatatagtg 491
Query: 927 ttgaatgctatcaaggaagccaccggttgtgaggtcggagggaacagtccctgcggcaag 986
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttgaatgccatcaaggaagccaccggttgtgaggtcggagggaacagtccctgcggcaag 551
Query: 987 ttttctatatcagaggttgaatgtcttggtgcatgtgtcaatgctccaatgatccaagtc 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ttttctatatcagaggttgaatgtcttggtgcatgtgtcaatgctccaatgatccaagtc 611
Query: 1047 aatgacgattactatgaagacttgacagttgaagactcgaaggaaattattaataaacta 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 aatgacgattactatgaagacttgacagttgaagactcgaaggaaattattaataaacta 671
Query: 1107 aagaaggatgagaaaccgaaacctgggccgagatctggccgatacgcttctgaacccctt 1166
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 672 aagaaggatgagaaaccgaaacctgggccgagatctggccgatacgcttctgaacccc-t 730
Query: 1167 tggaggtttgacctcgctcaccgaacaaccgaccggacctggctt 1211
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 cggaggtttgacctcgctcaccgaacaaccgaccggacctggctt 775
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 234,443
Number of extensions: 5429
Number of successful extensions: 5429
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5428
Number of HSP's successfully gapped: 1
Length of query: 1732
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1715
Effective length of database: 8,119,229
Effective search space: 13924477735
Effective search space used: 13924477735
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)