BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11072 (UTR included)
(4102 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01008X1F12 1469 0.0
BF01016B1B11 926 0.0
>BF01008X1F12
Length = 751
Score = 1469 bits (741), Expect = 0.0
Identities = 747/749 (99%)
Strand = Plus / Plus
Query: 2644 cagacgacgagctagacgctattattgacagcgttacagtattctatagagtgacaccga 2703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 cagacgacgagctagacgctattattgacagcgttacagtattctatagagtgacaccga 62
Query: 2704 agcacaagctggctattgtgaagtcactgcagcgacttggaaatatagtcgggatgaccg 2763
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 aacacaagctggctattgtgaagtcactgcagcgacttggaaatatagtcgggatgaccg 122
Query: 2764 gtgacggtgtgaacgacggagtggcgttgaagagagctgacattggcatagcgatgggca 2823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gtgacggtgtgaacgacggagtggcgttgaagagagctgacattggcatagcgatgggca 182
Query: 2824 agaacggcactgacgtttgcaaagaggcggcggacatgatactcgttgacgacgacttcg 2883
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 agaacggcacagacgtttgcaaagaggcggcggacatgatactcgttgacgacgacttcg 242
Query: 2884 ctaccatcatttcagccatcgaggaaggcaagtgcatcttttacaacatccgcaacttcg 2943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ctaccatcatttcagccatcgaggaaggcaagtgcatcttttacaacatccgcaacttcg 302
Query: 2944 tccggttccaactctccacgtccatagcggccctgatgctggtggcgctggccacgctga 3003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tccggttccaactctccacgtccatagcggccctgatgctggtggcgctggccacgctga 362
Query: 3004 tgggtgtaccgaacccgctgaacgccatgcagatactgtggatcaatatcatcatggatg 3063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgggtgtaccgaacccgctgaacgccatgcagatactgtggatcaatatcatcatggatg 422
Query: 3064 gcccgccggcgcagtcgctcggagtggagcccgtggaccacgaggtgctgaagcagaagc 3123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gcccgccggcgcagtcgctcggagtggagcccgtggaccacgaggtgctgaagcagaagc 482
Query: 3124 cgcgcgacacctcgcggaggatcatctcccgctcgctgctgttgtcagtgctgctatcag 3183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cgcgcgacacctcgcggaggatcatctcccgctcgctgctgttgtcagtgctgctatcag 542
Query: 3184 cggccatcatcatcgccggcactctgttcgtgtttaacagagagatgtcggacaacaaga 3243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cggccatcatcatcgccggcactctgttcgtgtttaacagagagatgtcggacaacaaga 602
Query: 3244 taactccccgcgacacgaccatgaccttcacgtgtttcgtgctgttcgacatgttcaacg 3303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 taactccccgcgacacgaccatgaccttcacgtgtttcgtgctgttcgacatgttcaacg 662
Query: 3304 ccctgtcctgccggtcacagaccaagtccgtgttccagatagggctgttctctaacagag 3363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ccctgtcctgccggtcacagaccaagtccgtgttccagatagggctgttctctaacagag 722
Query: 3364 tgttccttatagccgtgaccttgagcctc 3392
|||||||||||||||||||||||||||||
Sbjct: 723 tgttccttatagccgtgaccttgagcctc 751
>BF01016B1B11
Length = 759
Score = 926 bits (467), Expect = 0.0
Identities = 479/483 (99%)
Strand = Plus / Plus
Query: 930 gtggctgaacgtctccaagtagatgtccggagaggcctaacatggcgggatgcgaacgat 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gtggctgaacgtctccaagtagatgtccggagaggcctaacatggcgggatgcgaacgat 336
Query: 990 cgcatgaacttcgtgggcccgaacgagttccaggtgaaagagcaggaaccgctatggagg 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 cgcatgaacttcgtgggcccgaacgagttccaggtgaaagagcaggaaccgctatggagg 396
Query: 1050 aagtacatagaacagttccagaacccgctgatacttctgttgcttggttcagccgtggtg 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aagtacatagaacagttccagaacccgctgatacttctgttgcttggttcagccgtggtg 456
Query: 1110 agtgtgtgtatgcgacaattcgacgatgctctctcaattacgattgccatcatcatagta 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 agtgtgtgtatgcgacaattcgacgatgctctctcaattacgattgccatcatcatagta 516
Query: 1170 gtgacggtggccttcgtacaggaataccgttcagagaagtcgttggaagagttgaacaaa 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gtgacggtggccttcgtacaggaataccgttcagagaagtcgttggaagagttgaacaaa 576
Query: 1230 ctcgttccaccatcatgcaactgcctccgcgagagtcgtgtcgaacatttcctggcccgt 1289
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 577 ctcgttccaccatcatgcaactgcctccgcgagagtcgtgttgaacatttcctggcccgt 636
Query: 1290 aacttggttcccggtgatatcgtccatctcaatgtgggagacagagtaccagctgacctt 1349
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 637 aacttggttcccggtgatatcgtccatctcaatgtgggagacagagtaccagctgatctt 696
Query: 1350 cgtctttacgactccactgatctggcgatagatgagtcgtcctttactggcgaaacggaa 1409
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 697 cgtctttacgactctactgatctagcgatagatgagtcgtcctttactggcgaaacggaa 756
Query: 1410 ccg 1412
|||
Sbjct: 757 ccg 759
Score = 876 bits (442), Expect = 0.0
Identities = 442/442 (100%)
Strand = Plus / Plus
Query: 417 gtgacgtaccgttagcttgtgattttgtgatctttccgtgagaaaatgtcttttaatgct 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgacgtaccgttagcttgtgattttgtgatctttccgtgagaaaatgtcttttaatgct 60
Query: 477 taagctgcaagatattagagaaagatgaaaagcagccctaagcgtaaatatgagaatttc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taagctgcaagatattagagaaagatgaaaagcagccctaagcgtaaatatgagaatttc 120
Query: 537 tctgaacatcaaggaaaagaagctgacaaatattctctagacagtcaagacaccgccagt 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctgaacatcaaggaaaagaagctgacaaatattctctagacagtcaagacaccgccagt 180
Query: 597 ctgcattctacagaggaggcgcggcgcgacgtgagcgccggcgctggtgacatgtggatc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgcattctacagaggaggcgcggcgcgacgtgagcgccggcgctggtgacatgtggatc 240
Query: 657 agcgcggtcgagagttccatactcagctgggaggaggtggctgaacgtctccaagtagat 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agcgcggtcgagagttccatactcagctgggaggaggtggctgaacgtctccaagtagat 300
Query: 717 gtccggagaggcctaacatggcgggatgcgaacgatcgcatgaacttcgtgggcccgaac 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtccggagaggcctaacatggcgggatgcgaacgatcgcatgaacttcgtgggcccgaac 360
Query: 777 gagttccaggtgaaagagcaggaaccgctatggaggaagtacatagaacagttccagaac 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagttccaggtgaaagagcaggaaccgctatggaggaagtacatagaacagttccagaac 420
Query: 837 ccgctgatacttctgttgcttg 858
||||||||||||||||||||||
Sbjct: 421 ccgctgatacttctgttgcttg 442
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 341,121
Number of extensions: 5424
Number of successful extensions: 5424
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5424
Number of HSP's successfully gapped: 3
Length of query: 4102
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4084
Effective length of database: 8,109,745
Effective search space: 33120198580
Effective search space used: 33120198580
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)