BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11079 (UTR included)
(3682 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2181_C1 1808 0.0
>BF14_2181_C1
Length = 929
Score = 1808 bits (912), Expect = 0.0
Identities = 924/929 (99%)
Strand = Plus / Plus
Query: 1764 atgaaagaagaaactctagtaaaagcagaaaacacaatcgaaaatgaaaggaaggaaagt 1823
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 atgaaagaagaaactctagtaaaagcagaaaacannntcgaaaatgaaaggaaggaaagt 60
Query: 1824 gaagaaaattcagaattaaagtctgctgtagattgtaaaaaaacaaagcctttgttacct 1883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagaaaattcagaattaaagtctgctgtagattgtaaaaaaacaaagcctttgttacct 120
Query: 1884 acaaatttccttaaaacatgtaagaagaatttagcagatatgacccgagatgagcttgaa 1943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acaaatttccttaaaacatgtaagaagaatttagcagatatgacccgagatgagcttgaa 180
Query: 1944 caattctgtatcatgaaaatagtggaaggtgttgttgatagaagcaatttggcagaaata 2003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caattctgtatcatgaaaatagtggaaggtgttgttgatagaagcaatttggcagaaata 240
Query: 2004 aaaaatcaattgaaaacaatggctcagaatcttgatgaatacaagaaaaggacacaaatg 2063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaaatcaattgaaaacaatggctcagaatcttgatgaatacaagaaaaggacacaaatg 300
Query: 2064 atatcaaaacagaacagggatttgcaggttgtgttgaaatctgttcaagaggaacagaag 2123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atatcaaaacagaacagggatttgcaggttgtgttgaaatctgttcaagaggaacagaag 360
Query: 2124 aagggtccagatcatgtcattaatccattgaaaattacaagatctgtcggcatgcaagtg 2183
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagggtccagatcatgccattaatccattgaaaattacaagatctgtcggcatgcaagtg 420
Query: 2184 ctaatgacagataaatgtgcagctagaaggaaatcagtcgtaggaccaaataataataca 2243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctaatgacagataaatgtgcagctagaaggaaatcagtcgtaggaccaaataataataca 480
Query: 2244 aataacaaacagattaaatcacgattaattaatagtaagaagactcaaatgattcccgta 2303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aataacaaacagattaaatcacgattaattaatagtaagaagactcaaatgattcccgta 540
Query: 2304 cctaggttggtgccggcggtcactactactaatgtaagcaataagtcacctacaaataaa 2363
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 541 cctaggttggtgccggcggtcactactactaatgtaaacaataagtcacctacaaataaa 600
Query: 2364 caagcttctgggtcattccttaatggagtatctgttaagagttcacctccggcaccaaag 2423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caagcttctgggtcattccttaatggagtatctgttaagagttcacctccggcaccaaag 660
Query: 2424 actgagaaaaggactcatagtaaaatgcaacagaataatccagatacagtggacctaaca 2483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 actgagaaaaggactcatagtaaaatgcaacagaataatccagatacagtggacctaaca 720
Query: 2484 gatgatgaaccaccaagtaaacaaccccagagaaatattaacccaccagtcagattggtc 2543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gatgatgaaccaccaagtaaacaaccccagagaaatattaacccaccagtcagattggtc 780
Query: 2544 ccaccacaaaatttaatggctacaccaagacaaacgttttctagcaatataaatagtccc 2603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ccaccacaaaatttaatggctacaccaagacaaacgttttctagcaatataaatagtccc 840
Query: 2604 cgtaaagtatatataccaataagtggttcacagactcaaagtgttcgtcccggacaaaca 2663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cgtaaagtatatataccaataagtggttcacagactcaaagtgttcgtcccggacaaaca 900
Query: 2664 ttcatgcttaaagctatatcacctgcaca 2692
|||||||||||||||||||||||||||||
Sbjct: 901 ttcatgcttaaagctatatcacctgcaca 929
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 470,028
Number of extensions: 9004
Number of successful extensions: 9004
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9004
Number of HSP's successfully gapped: 1
Length of query: 3682
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3664
Effective length of database: 8,109,745
Effective search space: 29714105680
Effective search space used: 29714105680
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)