BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11085 (UTR included)
(2254 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038B1F02 1302 0.0
>BF01038B1F02
Length = 822
Score = 1302 bits (657), Expect = 0.0
Identities = 692/703 (98%), Gaps = 3/703 (0%)
Strand = Plus / Plus
Query: 471 gcagataaattaacgctcgataaagttgccatgaaagatcgtgcaacggcacatcttcga 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gcagataaattaacgctcgataaagttgccatgaaagatcgtgcaacggcacatcttcga 182
Query: 531 atatacgtcggggggcttacggatgaggccaatgtagacgaactatacaaccattttata 590
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 atatacgttggggggcttacggatgaggccaatgtagacgaactatacaaccattttata 242
Query: 591 gagtatggccaaattgacggtatcataataaacagaatattcggatttgtacaattccaa 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gagtatggccaaattgacggtatcataataaacagaatattcggatttgtacaattccaa 302
Query: 651 caggaatcaagcgctaatgacgctatagcaaaagcaaatggaagtgtttttcaaggcaaa 710
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 caggaatcgagcgctaatgacgctatagcaaaagcaaatggaagtgtttttcaaggcaaa 362
Query: 711 aagataacagttagagcagctcttagaaatagtggaccaaaacccagggaaacagaaaca 770
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 363 aagataacagttagagcagctctcagaaatagtggaccaaaacc---ggaaacagaaaca 419
Query: 771 gtaacaattaaaaacgacattcctcccgttgcacctctcagtgataataaaatgcctgtt 830
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 420 gtaacaattaaaaacgacattcctcccgctgcacctctcagtgataataaaatgcctgtt 479
Query: 831 gcagaagaggttcctgaagaacaatatgacaattatggaaactatgatcagggttataga 890
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ccagaagaggttcctgaagaacaatatgacaattatggaaactatgatcagggttataga 539
Query: 891 gaagaagactatgatgatggttacaagggttggaacgagcgggacgtatctcggggaggc 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gaagaagactatgatgatggttacaagggttggaacgagcgggacgtatctcggggaggc 599
Query: 951 ttgagggggagaggccgcggtagaggcagagggagggggagtataagagaaaacgatgct 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ttgagggggagaggccgcggtagaggcagagggagggggagtataagagaaaacgatgct 659
Query: 1011 agggggttcagggacagatcaccactaagaggtgactggcccgaaagaaactttgaccga 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 agggggttcagggacagatcaccactaagaggtgactggcccgaaagaaactttgaccga 719
Query: 1071 tacagtcaacctgattatccaagagcattaccagtacctgaaaggaatgactgtgagatt 1130
|||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 720 tacacacaacctgattatccgagagcattaccagtacctgaaaggaatgactgtgagatt 779
Query: 1131 attgtagtgtcaaaagctttaacagaatatgcagagtacatag 1173
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 attgtagtgtcaaaagctttaacagaatatgcagagtacatag 822
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 336,558
Number of extensions: 26148
Number of successful extensions: 26148
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 26147
Number of HSP's successfully gapped: 1
Length of query: 2254
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2237
Effective length of database: 8,119,229
Effective search space: 18162715273
Effective search space used: 18162715273
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)