BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11086 (UTR included)
(2110 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060A2G11 1142 0.0
>BF01060A2G11
Length = 853
Score = 1142 bits (576), Expect = 0.0
Identities = 585/588 (99%)
Strand = Plus / Plus
Query: 498 agaatgagttcaacggagacgatcaatgtaacggctcagccgctctcgaaagctgttgaa 557
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 266 agaatgagttcaacggagacgatcaatgtaacggctcagccgctctcaaaagcagttgaa 325
Query: 558 gagatcctgaagccgctccaggaaccggtgttcctacagacgagaagtgctcaggtcatt 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gagatcctgaagccgctccaggaaccggtgttcctacagacgagaagtgctcaggtcatt 385
Query: 618 gcggggatatttgtatggacggcactgttcattacttgccaacagatttatcaacacctc 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gcggggatatttgtatggacggcactgttcattacttgccaacagatttatcaacacctc 445
Query: 678 cgttggtacacgaatccgtctgagcagcgatggatagtacgtattcttttcatcgtacca 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 cgttggtacacgaatccgtctgagcagcgatggatagtacgtattcttttcatcgtacca 505
Query: 738 atctacggatgctacagttggatatcgctgcttttcttcaatggcgactcttactacgtc 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 atctacggatgctacagttggatatcgctgcttttcttcaatggcgactcttactacgtc 565
Query: 798 tactttttcacagtcagagactgttatgaagcgttcgtgatatacagtttcctgtctcta 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tactttttcacagtcagagactgttatgaagcgttcgtgatatacagtttcctgtctcta 625
Query: 858 tgctatgagtacctcggaggtgagggtaacataatgtctgagctgagaggtcgcccagtg 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgctatgagtacctcggaggtgagggtaacataatgtctgagctgagaggtcgcccagtg 685
Query: 918 agagcttcctgtgtcaatggcacctgttgcctctccggtgcgacttacactataggattc 977
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 686 agagcttcctgtgtcaatggcacctgttgcctctccggtgcgacttacactataggcttc 745
Query: 978 ttgagattctgtaagcaggccacgctgcagttctgtctggtgaagccggtttgcgctttc 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ttgagattctgtaagcaggccacgctgcagttctgtctggtgaagccggtttgcgctttc 805
Query: 1038 atcatcatcttcctgcagtcctctggccactaccatgatggtgattgg 1085
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 atcatcatcttcctgcagtcctctggccactaccatgatggtgattgg 853
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 285,120
Number of extensions: 6175
Number of successful extensions: 6175
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6175
Number of HSP's successfully gapped: 1
Length of query: 2110
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2093
Effective length of database: 8,119,229
Effective search space: 16993546297
Effective search space used: 16993546297
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)