BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11100 (UTR included)
(1918 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2799_C1 1620 0.0
>BF14_2799_C1
Length = 830
Score = 1620 bits (817), Expect = 0.0
Identities = 826/829 (99%)
Strand = Plus / Plus
Query: 517 gattggtaaatactgaaggatcggagggcgaacaaaggtcggagggcgaccgcccagcaa 576
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2 gattggtaaatactgaaggatcagagggcgaacaaaggtcggagggcgaccgcccagcaa 61
Query: 577 catcggaacgagaagcttacttccaggctttgcgactatggattcaacaagcgcagatgt 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 catcggaacgagaagcttacttccaggctttgcgactatggattcaacaagcgcagatgt 121
Query: 637 atcaaaacatatcgacatgtttcccatactatatgatgactttacaaggactccagaaca 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atcaaaacatatcgacatgtttcccatactatatgatgactttacaaggactccagaaca 181
Query: 697 atacaacaaatgttcctctattaaataataactatcaatttcatggtcagaacttcccat 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atacaacaaatgttcctctattaaataataactatcaatttcatggtcagaacttcccat 241
Query: 757 tccaagtcccaattcaggctcgtcctcccggagacaaccaagctcaacctgaaccattct 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tccaagtcccaattcaggctcgtcctcccggagacaaccaagctcaacctgaaccattct 301
Query: 817 caccagctgaaattatagccagacatggaggctatgaatatgtgataccaccgctatata 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 caccagctgaaattatagccagacatggaggctatgaatatgtgataccaccgctatata 361
Query: 877 aaaggatgattgcggagtttattgatttcttgctgctcttcattcttaaattgattgtga 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aaaggatgattgcggagtttattgatttcttgctgctcttcattcttaaattgattgtga 421
Query: 937 cctgtattgctgttgacctgtttgggttaattgacttggataaatttgatttctacaaat 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cctgtattgctgttgacctgtttgggttaattgacttggataaatttgatttctacaaat 481
Query: 997 tcagtgaagcctatgatgattacaaatatgctttggaactcacaacggaactcctcttct 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tcagtgaagcctatgatgattacaaatatgctttggaactcacaacggaactcctcttct 541
Query: 1057 tggaaatcatttatagggccctggtttgcgtattcgaggctttctgcttaagtagcagtg 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tggaaatcatttatagggccctggtttgcgtattcgaggctttctgcttaagtagcagtg 601
Query: 1117 ttgggaggacggggggtgctacacctggcaaagctcttcttggtctgagagtggtgaccg 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ttgggaggacggggggtgctacacctggcaaagctcttcttggtctgagagtggtgaccg 661
Query: 1177 cttctgccataataccagtggaaggtagaccccgcgagacagttctattacatcctggca 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cttctgccataataccagtggaaggtagaccccgcgagacagttctattacatcctggca 721
Query: 1237 aacctttaagcttccttctagcattaacgcgctccttaataaagaacttcctaatcaccc 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aacctttaagcttccttctagcattaacgcgctccttaataaagaacttcctaatcaccc 781
Query: 1297 tcttatttcccctatgcctcattctgtttgttttccgtcacaatcgtac 1345
| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 782 tgttatttcccctatgcctcattctgtttgtttttcgtcacaatcgtac 830
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 257,691
Number of extensions: 5366
Number of successful extensions: 5366
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5366
Number of HSP's successfully gapped: 1
Length of query: 1918
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1901
Effective length of database: 8,119,229
Effective search space: 15434654329
Effective search space used: 15434654329
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)