BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11104 (UTR included)
(2875 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040A2D10 1564 0.0
>BF01040A2D10
Length = 805
Score = 1564 bits (789), Expect = 0.0
Identities = 801/805 (99%)
Strand = Plus / Plus
Query: 992 agacaggggtgtgtcattatcatacttctttcctgatcaggcaacattccctggacaccc 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agacaggggtgtgtcattatcatacttctttcctgatcaggcaacattccctggacaccc 60
Query: 1052 acgttataagacactggccgaaaacattcggaagagaagaggaaatagaatggccataaa 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acgttataagacactggccgaaaacattcggaagagaagaggaaatagaatggccataaa 120
Query: 1112 tattccagttttccgcgatgtgaacactaagattcctatcgacgattaccacaagatact 1171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattccagttttccgcgatgtgaacactaagattcctatcgacgattaccacaagatact 180
Query: 1172 gccagatttggccaaaccagactccgtgtatttggatgctatgggtttgggtatggggtg 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gccagatttggccaaaccagactccgtgtatttggatgctatgggtttgggtatggggtg 240
Query: 1232 ctgctgtcttcaggtcacattccaggcttgttgtataactgaagctcgcacattgtacga 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgctgtcttcaggtcacattccaggcttgttgtataactgaagctcgcacattgtacga 300
Query: 1292 tcaacttgcccctttatgtccaatcatgctagcgttgtctgccgcttctcccgtgtaccg 1351
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 301 ccaacttgcccctttatgtccaatcatgctagcgttgtctgccgcgtctcccgtgtaccg 360
Query: 1352 aggttacctgacggatgttgactgccgctggaatgtcgtctcggcctcggtggattgccg 1411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggttacctgacggatgttgactgccgctggaatgtcgtctcggcctcggtggattgccg 420
Query: 1412 tactagagaggagttgggcttagagccgctgaagaatgacaagttccgcatacacaaatc 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tactagagaggagttgggcttagagccgctgaagaatgacaagttccgcatacacaaatc 480
Query: 1472 acgttacgactccatcgattcctacctatcacctgaacatgagaagtacaacgatatcga 1531
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 481 acgttacgactccatcgattcctacctatcacctgaacatgaaaagtacaacgatatcga 540
Query: 1532 ggtggtgcacgatcccgcagtgtaccgccgtcttcgcgagggtggtatagatcaccctct 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggtggtgcacgatcccgcagtgtaccgccgtcttcgcgagggtggtatagatcaccctct 600
Query: 1592 ggcgatccacgtggcacatctcttcatacgagacaccgtgtctctgttcagtgaaaaggt 1651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggcgatccacgtggcacatctcttcatacgagacaccgtgtctctgttcagtgaaaaggt 660
Query: 1652 tcaccaggatgacgagaatgatactgatcattttgaaaacattcaatctaccaactggca 1711
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 661 tcaccaggatgacgagaatgatactgatcattttgaaaacattcagtctaccaactggca 720
Query: 1712 gaccatgcgtttcaagccgcctcctccgaactcgccgatcggttggcgcgtcgagttccg 1771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gaccatgcgtttcaagccgcctcctccgaactcgccgatcggttggcgcgtcgagttccg 780
Query: 1772 tccatgtgacgctcaactcacagac 1796
|||||||||||||||||||||||||
Sbjct: 781 tccatgtgacgctcaactcacagac 805
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 288,911
Number of extensions: 5216
Number of successful extensions: 5216
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5216
Number of HSP's successfully gapped: 1
Length of query: 2875
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2858
Effective length of database: 8,119,229
Effective search space: 23204756482
Effective search space used: 23204756482
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)