BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11110 (UTR included)
(5092 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020B1C03 724 0.0
BF14_736_C1 90 4e-17
BF01059B2F03 76 6e-13
BF01054B2B08 74 2e-12
BF01020B1H07 70 4e-11
BF01011A1B08 70 4e-11
>BF01020B1C03
Length = 787
Score = 724 bits (365), Expect = 0.0
Identities = 386/393 (98%)
Strand = Plus / Plus
Query: 3181 ttcgcatcatttatgccggtgcatactcgatagaggtgggcatacgaggcggcaatacag 3240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcgcatcatttatgccggtgcatactcgatagaggtgggcatacgaggcggcaatacag 60
Query: 3241 taactattcgagacggttcttattctaagttcgacagatgttccgtcgtcgatgaatttg 3300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taactattcgagacggttcttattctaagttcgacagatgttccgtcgtcgatgaatttg 120
Query: 3301 ctcctgcacaagggttaaagactttcttgtcgcgatatgtcgacgacaacatcagtgcga 3360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 121 ctcctgcacaagggttaaagactttcttgtcgcgatatgtcgacgacaacatcagtgcaa 180
Query: 3361 gactcctggcggaggacgacaaccctccctcgccgatgtcaccgatgccaccaggcggtc 3420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gactcctggcggaggacgacaaccctccctcgccgatgtcaccgatgccaccaggcggtc 240
Query: 3421 ttcgtttccccgccccgctgactccccctcagccgcatacaccgcactcggcgcctgtga 3480
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 241 ttcgtttccccgccccgctgactccccctcagccgcacacaccgcactcggcgcccgtga 300
Query: 3481 caccgcacccggcatcgccggcacaacatcagatgggcggtggatccttcaacctgactt 3540
| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 301 cgccgcacccggcgtcgccggcacaacatcagatgggcggtggatccttcaacctgacgt 360
Query: 3541 caccgccgggtggtgcgggaggctcgggtggcg 3573
|||| ||||||||||||||||||||||||||||
Sbjct: 361 cacccccgggtggtgcgggaggctcgggtggcg 393
Score = 634 bits (320), Expect = 0.0
Identities = 329/332 (99%)
Strand = Plus / Plus
Query: 3573 gcgccggtcgcttccccccaccctccccctacgtctccgttcaccgcttggcccgcgtcg 3632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gcgccggtcgcttccccccaccctccccctacgtctccgttcaccgcttggcccgcgtcg 515
Query: 3633 ccgtctctaccgcgtccctcgcctggacatcatccctcgcccagacatcatatcgaacac 3692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ccgtctctaccgcgtccctcgcctggacatcatccctcgcccagacatcatatcgaacac 575
Query: 3693 aaggcgggtccacaagcgagttcgtctacggctgtacgtagtggatggcggtcgggtctg 3752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 aaggcgggtccacaagcgagttcgtctacggctgtacgtagtggatggcggtcgggtctg 635
Query: 3753 tcgccgggcacaccactggccgttggcaagttggaagcgctttgcacgccatccgagccc 3812
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tcgccgggcacaccactggctgttggcaagttggaagcgctttgcacgccatccgagcct 695
Query: 3813 cccccgggggcgccacctgggccacctctggccccgctgcaacgcttcctggcctgtcag 3872
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 696 cccccgggggcgccacctgggccacctctggcccccctgcaacgcttcctggcctgtcag 755
Query: 3873 tatatgaagcgaacgctgcagcgttttgtaca 3904
||||||||||||||||||||||||||||||||
Sbjct: 756 tatatgaagcgaacgctgcagcgttttgtaca 787
>BF14_736_C1
Length = 796
Score = 89.7 bits (45), Expect = 4e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 6 ctcataggacgaaacgtagccattaaagacttcttcacgccgatcttctgtgaggggctg 65
||||| |||||||||| ||||| |||||||| |||||||||||||||||||||| || ||
Sbjct: 710 ctcattggacgaaacgcagccactaaagactacttcacgccgatcttctgtgagagggtg 651
Query: 66 gtacttccc 74
|||||||||
Sbjct: 650 gtacttccc 642
>BF01059B2F03
Length = 703
Score = 75.8 bits (38), Expect = 6e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 6 ctcataggacgaaacgtagccattaaagacttcttcacgccgatcttctgtgaggggctg 65
||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||| ||
Sbjct: 3 ctcatcggacgaaactcagccattaaaggctacttcacgccgatcttctgtgagggggtg 62
Query: 66 gt 67
||
Sbjct: 63 gt 64
>BF01054B2B08
Length = 807
Score = 73.8 bits (37), Expect = 2e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 14 acgaaacgtagccattaaagacttcttcacgccgatcttctgtgaggggctggtacttcc 73
|||||||| |||||||||||||| ||| |||||||||||||||||| |||| |||| |||
Sbjct: 696 acgaaacgcagccattaaagactgctttacgccgatcttctgtgagaggctagtacatcc 637
Query: 74 c 74
|
Sbjct: 636 c 636
>BF01020B1H07
Length = 733
Score = 69.9 bits (35), Expect = 4e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 13 gacgaaacgtagccattaaagacttcttcacgccgatcttctgtgaggggctggtactt 71
||||||||| || |||||| |||| |||||||||||||||||||||| || ||||||||
Sbjct: 21 gacgaaacgcagtcattaatgactacttcacgccgatcttctgtgagaggatggtactt 79
>BF01011A1B08
Length = 853
Score = 69.9 bits (35), Expect = 4e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 13 gacgaaacgtagccattaaagacttcttcacgccgatcttctgtgaggggctggtactt 71
||||||||| || |||||| |||| |||||||||||||||||||||| || ||||||||
Sbjct: 59 gacgaaacgcagtcattaatgactacttcacgccgatcttctgtgagaggatggtactt 117
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 392,414
Number of extensions: 6570
Number of successful extensions: 6570
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 6570
Number of HSP's successfully gapped: 7
Length of query: 5092
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5074
Effective length of database: 8,109,745
Effective search space: 41148846130
Effective search space used: 41148846130
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)