BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11113 (UTR included)
(3106 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062A2C10 1618 0.0
BF01038A1F12 1150 0.0
>BF01062A2C10
Length = 848
Score = 1618 bits (816), Expect = 0.0
Identities = 836/844 (99%)
Strand = Plus / Plus
Query: 384 ttttcaatttatattaatatttaatacataaatgcttacatatgaagcatgacaatattt 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ttttcaatttatattaatatttaatacataaatgcttacatatgaagcatgacaatattt 64
Query: 444 gataaaaagcgcacttttccaacgcaatattaaatatttaataagtaactaataacaatg 503
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 65 gataaaaagcgcacttttccaacgcaacattaaatatttaataagtaactaataacaatg 124
Query: 504 aaagctacaattttgggcattattttaactgtagtaatttcaatctttggtaatgttgtt 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aaagctacaattttgggcattattttaactgtagtaatttcaatctttggtaatgttgtt 184
Query: 564 gccaatggtgacttaccgaaacgagaggaaagaaagtctaaaggagttactacatttatt 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gccaatggtgacttaccgaaacgagaggaaagaaagtctaaaggagttactacatttatt 244
Query: 624 agcgccaaatgggaagcgacgccaattgtgctagaactggcggaatatttgtctgctgaa 683
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 245 agcgccaaatgggaagcgacgccaattgtactagaactggcggaatatttgtctgctgaa 304
Query: 684 agttctgatttattttggtcttattttgatggcattatttcacttaaatcaagcttagag 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 agttctgatttattttggtcttattttgatggcattatttcacttaaatcaagcttagag 364
Query: 744 tctttggagacagataaacaagtttatgatgcttgcattggagtagcaagtacattatta 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tctttggagacagataaacaagtttatgatgcttgcattggagtagcaagtacattatta 424
Query: 804 gctccggcacagctccgtatggctaagctagccttgtccatgcatttgacttcaccagca 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gctccggcacagctccgtatggctaagctagccttgtccatgcatttgacttcaccagca 484
Query: 864 gtccgcatgtttgatcagattgctacacaaaacggtgcaaaagagttgccctgtgaaaca 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gtccgcatgtttgatcagattgctacacaaaacggtgcaaaagagttgccctgtgaaaca 544
Query: 924 tttgtggcaattgcatcaagaaaagtttgtgataatgatatccttagggacattcttaaa 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tttgtggcaattgcatcaagaaaagtttgtgataatgatatccttagggacattcttaaa 604
Query: 984 tctacagtcaaatttgatccagaggagcatagaattgaaacatacctattagaccactca 1043
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tctacagacaaatttgatccagaggagcatagaattgaaacatacctattagaccactca 664
Query: 1044 tatcccagcagtgacaatagaagcctcacagctattctatatggagagctgggaaactct 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tatcccagcagtgacaatagaagcctcacagctattctatatggagagctgggaaactct 724
Query: 1104 gacttttcagccaaacataaaatattatctggctacgctgataaaggtgttattaactat 1163
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 725 gacttttcagccaaacataaaatattatctggctacgctgatnannntgttattaactat 784
Query: 1164 gtggtcagatggaacataaaatctagaggcaagccaaaacttcgtctgtctggatatgga 1223
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 785 gtggtcagatggaacataaaatctagaggcaagccaaaacttcgtctatctggatatgga 844
Query: 1224 attg 1227
||||
Sbjct: 845 attg 848
>BF01038A1F12
Length = 806
Score = 1150 bits (580), Expect = 0.0
Identities = 589/592 (99%)
Strand = Plus / Plus
Query: 2005 ataattacgtgatagtgatagacccaacatcaccgtcgtccgcgccccctttaaagctgg 2064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataattacgtgatagtgatagacccaacatcaccgtcgtccgcgccccctttaaagctgg 60
Query: 2065 gtgagacattactgaaacatgctacgcctgtacgagtgggcttggtactggcaccgggac 2124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgagacattactgaaacatgctacgcctgtacgagtgggcttggtactggcaccgggac 120
Query: 2125 gcgactccgctctgggcaccgcactaagaagcgccttcaactatgtagcacaggagagga 2184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcgactccgctctgggcaccgcactaagaagcgccttcaactatgtagcacaggagagga 180
Query: 2185 attctaacaaggaggccttctatttccttacacaggttctcaattctcttcaagaagatg 2244
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 181 attctaacaaggaggccttctatttccttacacaggttctcaactctcttcaagaagatg 240
Query: 2245 ctctgagtgtggatcatataaaaaagtatctgaaaaagtatgccagttcgagcgcaaatc 2304
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctctgagtgtggatcatattaaaaagtatctgaaaaagtatgccagttcgagcgcaaatc 300
Query: 2305 tcgatgaaatcatttcagaggaatctgaattcaacttcggacaccaactggctgaggagt 2364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcgatgaaatcatttcagaggaatctgaattcaacttcggacaccaactggctgaggagt 360
Query: 2365 tcgtgtcgaagctgggaactaataaattccctcaagtgatagtgaatggcgttcctctgt 2424
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 361 tcgtgtcgaagctgggaactaataaattccctcaagtgatagtgaatggcgtccctctgt 420
Query: 2425 acgatgagggctctggtgcgttgtcttcggtggaactgctcgaggaggcgctagtgacgg 2484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acgatgagggctctggtgcgttgtcttcggtggaactgctcgaggaggcgctagtgacgg 480
Query: 2485 cactgtcgcgtcacacggcgcgtctacagcgagccgtgtttagagggaacctcgcagact 2544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cactgtcgcgtcacacggcgcgtctacagcgagccgtgtttagagggaacctcgcagact 540
Query: 2545 ccgacgacgccgtagagtatctcatgaagcagccgcatattgtgtccaggtt 2596
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccgacgacgccgtagagtatctcatgaagcagccgcatattgtgtccaggtt 592
Score = 238 bits (120), Expect = 4e-62
Identities = 120/120 (100%)
Strand = Plus / Plus
Query: 2965 caggttaaaccgtcgcgttcttgcatctgaaccgtctcagtacttagacttgtctggtgt 3024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 caggttaaaccgtcgcgttcttgcatctgaaccgtctcagtacttagacttgtctggtgt 646
Query: 3025 atcctcatcgagagatttattttccgaagacaaaattcatcgtctcctgcatttaactgg 3084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 atcctcatcgagagatttattttccgaagacaaaattcatcgtctcctgcatttaactgg 706
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 376,673
Number of extensions: 16727
Number of successful extensions: 16727
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 16727
Number of HSP's successfully gapped: 3
Length of query: 3106
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3088
Effective length of database: 8,109,745
Effective search space: 25042892560
Effective search space used: 25042892560
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)