BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11116 (UTR included)
(2233 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060B1D09 1586 0.0
BF01038A1E05 1528 0.0
>BF01060B1D09
Length = 833
Score = 1586 bits (800), Expect = 0.0
Identities = 820/827 (99%)
Strand = Plus / Plus
Query: 1329 gtttctaataacaatttggttacactgccatgcagtctgatgcaatgtagactagaaact 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttctaataacaatttggttacactgccatgcagtctgatgcaatgtagactagaaact 60
Query: 1389 attgatttgtcatcaaataaatttaattctgatacagtaggtgcaaaaatggctaattac 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgatttgtcatcaaataaatttaattctgatacagtaggtgcaaaaatggctaattac 120
Query: 1449 acaccgtgggaactatgtgcccacaccttggtacacattgcagctaaagcagtgttaaga 1508
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acaccatgggaactatgtgcccacaccttggtacacattgcagctaaagcagtgttaaga 180
Query: 1509 aataagctctattatgcaccaaacatagtaccatacacattagtagagctaatggacaat 1568
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 aataagctctattatgcaccaaacatagtaccatacacattagtggagctaatggacaat 240
Query: 1569 gccaatatgtgtgtttgtggtaagccagtgttgaataatgcgagatttattataaaggaa 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccaatatgtgtgtttgtggtaagccagtgttgaataatgcgagatttattataaaggaa 300
Query: 1629 tttcagctgaaagatttctttagggttgtcgtttttgataacaacggcgatagctctgtt 1688
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 301 tttcagctgaaagatttctttagggttgtcgtttttgataacaacggtgatagctctgtt 360
Query: 1689 ggttttgagtgcttcttttgttcaccaaaatgttatgccagatgatatttgcttttatta 1748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggttttgagtgcttcttttgttcaccaaaatgttatgccagatgatatttgcttttatta 420
Query: 1749 atctgtattggaactgcagattaataaaataattacgccattccataatgagagctctat 1808
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 421 atctgtattggaactgcagattaataaaataattacgccattccataatgagacctctat 480
Query: 1809 gaaccattggaatatttgatttggaaaatgacctttttaatataaatttctactgtggtt 1868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaaccattggaatatttgatttggaaaatgacctttttaatataaatttctactgtggtt 540
Query: 1869 taaaaattattggtaaagttattaacttattgcaatgcatgaacttgcgaaatgtctttt 1928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 taaaaattattggtaaagttattaacttattgcaatgcatgaacttgcgaaatgtctttt 600
Query: 1929 taaattctttataattataaagtttgtgtgcatacaattgaattttaacagtcatttcta 1988
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 601 taaattctttataattataaagtctgtgtgcatacaattgaattttaacagtcatttcta 660
Query: 1989 gtaataagtatatttcttagaatttatctatgtagtaaccattttgcttctaaatattct 2048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtaataagtatatttcttagaatttatctatgtagtaaccattttgcttctaaatattct 720
Query: 2049 ttttgccaaatgtttatattactataagtggctatgaagatattaatgtaacatgttatt 2108
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 721 ttttgccaaatgtttatattactataagtggctatgangatatcaatgtaacatgttatt 780
Query: 2109 taaatactttatattgttagaataaatgaaataattaattaataatc 2155
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 taaatactttatattgttagaataaatgaaataattaattaataatc 827
>BF01038A1E05
Length = 779
Score = 1528 bits (771), Expect = 0.0
Identities = 777/779 (99%)
Strand = Plus / Plus
Query: 373 ctggtcggaccgattaatgtggaactaagccttattgttttgatcgcataaaagatttgg 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggtcggaccgattaatgtggaactaagccttattgttttgatcgcataaaagatttgg 60
Query: 433 cgggtactggatcgagaattggaaaacgttatgtcttataaaattatttaatttttaacc 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgggtactggatcgagaattggaaaacgttatgtcttataaaattatttaatttttaacc 120
Query: 493 aaataaaaatgaaactgcagtgtcaagtggaagttgttaatagaaaacattttagtttag 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaataaaaatgaaactgcagtgtcaagtggaagttgttaatagaaaacattttagtttag 180
Query: 553 acgtaagaccaaagaataagtatttaaagtcgacacttgctttaggaaaggaaccaaaag 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acgtaagaccaaagaataagtatttaaagtcgacacttgctttaggaaaggaaccaaaag 240
Query: 613 atgataaaggatactttattttgcatttttctactgttaataaacaaggaacaaaatata 672
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 241 atgataaaggatactttattttgcatttttctactgttaataaacaagggacaaaatata 300
Query: 673 gagtcagcgatatgaagaatgtctttgtgaaatttttaaacgaaggcaaagttacactgc 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagtcagcgatatgaagaatgtctttgtgaaatttttaaacgaaggcaaagttacactgc 360
Query: 733 gctttactgaaccatgtcatgatttatgcataagaagtgaagtaatacaattgaagagtt 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctttactgaaccatgtcatgatttatgcataagaagtgaagtaatacaattgaagagtt 420
Query: 793 tcatgagattacttcaatcatgtattactggtgactcagctaacgtaaaactttccgaac 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcatgagattacttcaatcatgtattactggtgactcagctaacgtaaaactttccgaac 480
Query: 853 tgtcctccctgggactagtgtctaaagatatggctccaactaaattgacaattaacaatc 912
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgtcctccctgggactagtatctaaagatatggctccaactaaattgacaattaacaatc 540
Query: 913 gatctgaatttcccgctaaaggactgcccagaactcttgaatctctctatattgttggtc 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gatctgaatttcccgctaaaggactgcccagaactcttgaatctctctatattgttggtc 600
Query: 973 ttaatctttgcaattttcgaagagacatacttctactaaaccatctggctattcttgatt 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttaatctttgcaattttcgaagagacatacttctactaaaccatctggctattcttgatt 660
Query: 1033 tgagtaagaatgaaattgagaaaattcctcctgaatttgggagactacctaatctatgtg 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgagtaagaatgaaattgagaaaattcctcctgaatttgggagactacctaatctatgtg 720
Query: 1093 aactctacttatcaaataattccttaggacaaaaggaagactttgactggagatggctc 1151
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aactctacttatcaaataattccttaggacaaaaggaagactttgactggagatggctc 779
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 310,857
Number of extensions: 6621
Number of successful extensions: 6621
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6621
Number of HSP's successfully gapped: 2
Length of query: 2233
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2216
Effective length of database: 8,119,229
Effective search space: 17992211464
Effective search space used: 17992211464
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)