BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11117 (UTR included)
(1878 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1168_C1 1649 0.0
BF01056A2C10 272 2e-72
>BF14_1168_C1
Length = 840
Score = 1649 bits (832), Expect = 0.0
Identities = 838/840 (99%)
Strand = Plus / Plus
Query: 457 gtttaaatattggagttatttagtgcttaataatacctgtaattatggatgaagatttga 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttaaatattggagttatttagtgcttaataatacctgtaattatggatgaagatttga 60
Query: 517 tttttgacccttctttaaagaagaaaaagaagaagaagactggctttgatatggacgctg 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttttgacccttctttaaagaagaaaaagaagaagaagactggctttgatatggacgctg 120
Query: 577 cccttgcaagtgaacaaggcgataccacgagtgttgaggcgcctgctgagtccggtgacg 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cccttgcaagtgaacaaggcgataccacgagtgttgaggcgcctgctgagtccggtgacg 180
Query: 637 tcgacgtccccgaagatgaaaacatggacttggataattttggtaagaagaagaaaaaga 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgacgtccccgaagatgaaaacatggacttggataattttggtaagaagaagaaaaaga 240
Query: 697 agaagaagacctttttcaacttagacgaactggagagcgcgttgcctgaaacgaaagagg 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaagaagacctttttcaacttagacgaactggagagcgcgttgcctgaaacgaaagagg 300
Query: 757 aaaaaccgccatcggaagaaccagagcagcaggaggatgaagttatagatgacttagatc 816
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 301 aaaaaccgccatcggaagaaccagagcaacaggaggatgaagttatagatgacttagatc 360
Query: 817 tagaaatagatttttctaaaagtaagaagaagaaaaagaagaaaaatattgatgaactgg 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tagaaatagatttttctaaaagtaagaagaagaaaaagaagaaaaatattgatgaactgg 420
Query: 877 ttattgaagacgatgctaaaggagatgatcaagagagagaggacgatgtccatggcgatt 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttattgaagacgatgctaaaggagatgatcaagagagagaggacgatgtccatggcgatt 480
Query: 937 gggttggaagcgatcgtgattatacctacgacgagcttctggagcgtgtgtttgatataa 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gggttggaagcgatcgtgattatacctacgacgagcttctggagcgtgtgtttgatataa 540
Query: 997 tgagggaaaagaaccccagcatggtgtccggaaagaaacaaaaattcatcatgagaccac 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgagggaaaagaaccccagcatggtgtccggaaagaaacaaaaattcatcatgagaccac 600
Query: 1057 ctcaagttgttaggattggtacaaagaaaacatcatttgcaaactttacagagatttgta 1116
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctcaagtcgttaggattggtacaaagaaaacatcatttgcaaactttacagagatttgta 660
Query: 1117 aaacccttcatcgtcaaccaaaacatttactagacttcctccttgctgaattgggaacca 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaacccttcatcgtcaaccaaaacatttactagacttcctccttgctgaattgggaacca 720
Query: 1177 gtggttctgttgatggtaatagccagcttattattaaaggacgtttccaacagaaacaaa 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtggttctgttgatggtaatagccagcttattattaaaggacgtttccaacagaaacaaa 780
Query: 1237 tagaaaatgttttgcgccgatatattaaggaatatgtcacatgtcatacatgtcgctccc 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tagaaaatgttttgcgccgatatattaaggaatatgtcacatgtcatacatgtcgctccc 840
>BF01056A2C10
Length = 731
Score = 272 bits (137), Expect = 2e-72
Identities = 137/137 (100%)
Strand = Plus / Minus
Query: 1 agcctgtgcataccgtctcgtaatcaattgttttaattttggaaatgtcctatgtacttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 agcctgtgcataccgtctcgtaatcaattgttttaattttggaaatgtcctatgtacttt 87
Query: 61 taatagctgcatttttattcttttcttttataaccatcagaatttagacccaacactgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 taatagctgcatttttattcttttcttttataaccatcagaatttagacccaacactgaa 27
Query: 121 attcataggttattata 137
|||||||||||||||||
Sbjct: 26 attcataggttattata 10
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 271,880
Number of extensions: 6383
Number of successful extensions: 6383
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6375
Number of HSP's successfully gapped: 2
Length of query: 1878
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1861
Effective length of database: 8,119,229
Effective search space: 15109885169
Effective search space used: 15109885169
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)