BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11118 (UTR included)
(2593 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A2C10 1392 0.0
BF14_1168_C1 230 9e-60
BF01059A1F12 125 4e-28
>BF01056A2C10
Length = 731
Score = 1392 bits (702), Expect = 0.0
Identities = 717/722 (99%)
Strand = Plus / Plus
Query: 436 tataataacctatgaatttcagtgttgggtctaaattctgatggttataaaagaaaagaa 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tataataacctatgaatttcagtgttgggtctaaattctgatggttataaaagaaaagaa 69
Query: 496 taaaaatgcagctattaaaagtacataggacatttccaaaattaaaacaattgattacga 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 taaaaatgcagctattaaaagtacataggacatttccaaaattaaaacaattgattacga 129
Query: 556 gacggtatgcacaggctttacaaagggaacaggatgagtatacggatcaaccaaactatc 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gacggtatgcacaggctttacaaagggaacaggatgagtatacggatcaaccaaactatc 189
Query: 616 cacctatattggatatgactccaaacggaaaaaagaaacgtgaaagggaaacaacccgcc 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cacctatattggatatgactccaaacggaaaaaagaaacgtgaaagggaaacaacccgcc 249
Query: 676 aaaatatcaaaaacattaacacggttgaagaaaaacaaattgctttaaatatgccgcgat 735
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 250 aaaatatcaaaaacattaacacagttgaagaaaaacaaattgctttaaatatgccgcgat 309
Query: 736 attatggttgggaatgcgtaatgttaaacgaagataaaataccatacaatgcaatgcctt 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 attatggttgggaatgcgtaatgttaaacgaagataaaataccatacaatgcaatgcctt 369
Query: 796 tggttcaatattatacaagaacccactttaaacctgtagagagccttcctgatgtctacc 855
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 370 tggttcaatattatacaagaacccactttaaacctgtagagagccttcttgatgtctacc 429
Query: 856 aagactcatcttccgtggctgatactgtagtgcaagaaataaagtcccaaattgaggatt 915
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aagactcatcttccatggctgatactgtagtgcaagaaataaagtcccaaattgaggatt 489
Query: 916 gtattgttattgaaaatgaaggaatacagcgaaaaattaccacagtactagaaaagactg 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gtattgttattgaaaatgaaggaatacagcgaaaaattaccacagtactagaaaagactg 549
Query: 976 aagaagagcaaagggaaaatgcacaaacaagaaatatagttaaacagattaacagaatta 1035
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aagaagaacaaagggaaaatgcacaaacaagaaatatagttaaacagattaacagaatta 609
Query: 1036 taacaaacaatttatcagataaagtctcacatatattatcctcacaggtggactatgatc 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 taacaaacaatttatcagataaagtctcacatatattatcctcacaggtggactatgatc 669
Query: 1096 caagacatgaagcattctggtttgttggcggggttgatcttcctccaaaattgatttctt 1155
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 670 caagacatgaagcattctggtttgttggaggggttgatcttcctccaaaattgatttctt 729
Query: 1156 cc 1157
||
Sbjct: 730 cc 731
>BF14_1168_C1
Length = 840
Score = 230 bits (116), Expect = 9e-60
Identities = 116/116 (100%)
Strand = Plus / Minus
Query: 1 gtccatatcaaagccagtcttcttcttctttttcttctttaaagaagggtcaaaaatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 gtccatatcaaagccagtcttcttcttctttttcttctttaaagaagggtcaaaaatcaa 57
Query: 61 atcttcatccataattacaggtattattaagcactaaataactccaatatttaaac 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 atcttcatccataattacaggtattattaagcactaaataactccaatatttaaac 1
>BF01059A1F12
Length = 840
Score = 125 bits (63), Expect = 4e-28
Identities = 99/111 (89%)
Strand = Plus / Minus
Query: 2456 taagctgagctttgcatttgtgtgagtgcacacaatagtataggtgtgaagtcaaatttg 2515
||||| |||||||||||||||||||||||||||| |||| || |||||| |||||||||
Sbjct: 616 taagccgagctttgcatttgtgtgagtgcacacagtagtgtatgtgtgatatcaaatttg 557
Query: 2516 tgcgtaccacgtgctttgctaggtttaaaccggtttatactgcttttactt 2566
||||| ||||| ||||| |||||||| | ||||||||||||| ||||||||
Sbjct: 556 tgcgtgccacgcgcttttctaggtttgatccggtttatactggttttactt 506
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 347,914
Number of extensions: 7687
Number of successful extensions: 7687
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 7687
Number of HSP's successfully gapped: 3
Length of query: 2593
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2576
Effective length of database: 8,119,229
Effective search space: 20915133904
Effective search space used: 20915133904
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)