BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11119 (UTR included)
(3721 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031B1B02 815 0.0
BF01060B1D09 186 2e-46
>BF01031B1B02
Length = 768
Score = 815 bits (411), Expect = 0.0
Identities = 429/435 (98%)
Strand = Plus / Plus
Query: 2183 tctttatagagaggcattggacctctttagtaaagatgatgaaatatacaaacagatttg 2242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tctttatagagaggcattggacctctttagtaaagatgatgaaatatacaaacagatttg 393
Query: 2243 tgatgactttggactatacttaaaattaaaaaaacaatatgtagaggctggtattgtata 2302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tgatgactttggactatacttaaaattaaaaaaacaatatgtagaggctggtattgtata 453
Query: 2303 tgaaacggctaaaaatattgataaagccattgaatgttacaaagacgcacttgagtggga 2362
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 454 tgaaacggctaaaaatattgataaagccattgaatgttacaaagaggcacttgagtggga 513
Query: 2363 attagttctgaatttagcccaaaataaaacaaagcaagaattgaaagacttatgttggga 2422
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 514 attagttctgaatttagcccaaaataaaacaaaacaagaattaaaagacttatgttggga 573
Query: 2423 tattgcaacagcattaaaagacgaaaagaggtatacagaggcattgacagttttagacac 2482
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tattgcaacagcattaaaagacgaaaagaggtatacagaggcattgacagttttagacat 633
Query: 2483 aataagtgaagatggtgaagaagtaatttgcatggctattgaatgtgcccaatataaaac 2542
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 634 aataagtgaagatggtgaagacgtaatttgcatggctattgaatgtgcccaatataaaac 693
Query: 2543 cgctttaagattaagttcaaaatacaataagagagatttaattgtcaaaaatttgctgcc 2602
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 694 cgctttaagattaagttcaaaatacaataagagagatttaattgtaaaaaatttgctgcc 753
Query: 2603 atctcttatgaatga 2617
|||||||||||||||
Sbjct: 754 atctcttatgaatga 768
>BF01060B1D09
Length = 833
Score = 186 bits (94), Expect = 2e-46
Identities = 99/101 (98%)
Strand = Plus / Minus
Query: 3621 gattattaattaattatttcatttattctaacaatataaagtatttaaataacatgttac 3680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 gattattaattaattatttcatttattctaacaatataaagtatttaaataacatgttac 768
Query: 3681 attaatatcttcatagccacttatagtaatataaacatttg 3721
||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 767 attgatatcntcatagccacttatagtaatataaacatttg 727
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 504,359
Number of extensions: 10300
Number of successful extensions: 10300
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10300
Number of HSP's successfully gapped: 2
Length of query: 3721
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3703
Effective length of database: 8,109,745
Effective search space: 30030385735
Effective search space used: 30030385735
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)