BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11121 (UTR included)
(2275 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026A1H09 1352 0.0
>BF01026A1H09
Length = 726
Score = 1352 bits (682), Expect = 0.0
Identities = 715/726 (98%)
Strand = Plus / Plus
Query: 631 cccctgaacatgtcactaaagcacttgcagaaataactactggagaaaatccattattca 690
||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 1 cccctgaacatgtcactaaagcacttgcagaaataaccactggagaaaatccactattca 60
Query: 691 atcaatatacaagaggatttggtcaccccaggttagttcagaatttggcaaagctctact 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcaatatacaagaggatttggtcaccccaggttagttcagaatttggcaaagctctact 120
Query: 751 cgccgttagtaggcaaagagatagatccaaacaatgaaatattagtgacgagcggtgctt 810
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgccgttagtaggcaaagaaatagatccaaacaatgaaatattagtgacgagcggtgctt 180
Query: 811 acgaggcactgttctccactataatgggtcacgttgatgagggtgacgaagtcatagtga 870
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 181 acgaggcactgttctccactataatgggtcacgttgaagagggtgacgaagtcatagtga 240
Query: 871 ttgaaccgttctttgattgctacgaattcatgataaagacagctggtggtattcccaggt 930
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 241 ttgaaccgttctttgattgctacgaattcatgataaagacagctggtggcatccccaggt 300
Query: 931 gcatcgctttaaaacctaaagccactagtggaactatgacgtcagctgattgggtgctag 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcatcgctttaaaacctaaagccactagtggaactatgacgtcagctgattgggtgctag 360
Query: 991 atgaagccgagctggtgtcattgttcaatagcaagactaaaatgttgatcctgaacactc 1050
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 361 atgaagccgagctggtgtcattgttcaatagcaaaactaaaatgttgatactgaacactc 420
Query: 1051 cccacaaccccctggggaaagtgttcaccgcccaggagttagagaccatcgccaatctat 1110
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 421 cccacaaccccctggggaaagtgttcaccgcccaggagttagagaccatcgccaatctgt 480
Query: 1111 gcaagaagtacaacgtgctgtgcgtctctgacgaggtctacgaatggatggtgtacgcgc 1170
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 481 gcaagaagtacaacgtgctgtgcgtctctgacgaggtctacgaatggatggtgtacgcac 540
Query: 1171 caaataaacatatcagaatagcttcaatgccgggtatgtgggagcgtactataacaattg 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caaataaacatatcagaatagcttcaatgccgggtatgtgggagcgtactataacaattg 600
Query: 1231 gttcagcgggcaagaccttctccgtgaccggttggaagaccggttgggcgtacggtccag 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gttcagcgggcaagaccttctccgtgaccggttggaagaccggttgggcgtacggtccag 660
Query: 1291 ccaacctcatgaggaacttgcaggtggtgcatcagaactgcgtatacacgtgctgcactc 1350
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccaacctcatgaggaacctgcaggtggtgcatcagaactgcgtatacacgtgctgcactc 720
Query: 1351 ctatac 1356
||||||
Sbjct: 721 ctatac 726
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 216,580
Number of extensions: 3518
Number of successful extensions: 3518
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3518
Number of HSP's successfully gapped: 1
Length of query: 2275
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2258
Effective length of database: 8,119,229
Effective search space: 18333219082
Effective search space used: 18333219082
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)