BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11128 (UTR included)
(4534 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010A2G03 658 0.0
>BF01010A2G03
Length = 874
Score = 658 bits (332), Expect = 0.0
Identities = 334/335 (99%)
Strand = Plus / Plus
Query: 3743 ttcaggaggattaattctaacgggaaatccgttgcggtgcgagtgtgaattggcttggct 3802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ttcaggaggattaattctaacgggaaatccgttgcggtgcgagtgtgaattggcttggct 595
Query: 3803 gggcgcatggttgcgacgatggttacaagagaatgaggctaatggggaattaagacgagc 3862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gggcgcatggttgcgacgatggttacaagagaatgaggctaatggggaattaagacgagc 655
Query: 3863 ggtccgaagtgccacctgcaaagaccagctagggagacctgttccgctccttcaattacg 3922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ggtccgaagtgccacctgcaaagaccagctagggagacctgttccgctccttcaattacg 715
Query: 3923 tgccgacgaagccgattgtcacgctagtgcgctgtcgagtgatgcacaacccaactatag 3982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 tgccgacgaagccgattgtcacgctagtgcgctgtcgagtgatgcacaacccaactatag 775
Query: 3983 caacgtcatttacacatttgcaatcacagtattgtttattacacttagatgataatgata 4042
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 776 caacgtcatttacacatttgcaatcacagtattgtttattacacttagatgatnatgata 835
Query: 4043 tatttataattttgtgcttataaattgtacaatta 4077
|||||||||||||||||||||||||||||||||||
Sbjct: 836 tatttataattttgtgcttataaattgtacaatta 870
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 606,979
Number of extensions: 12864
Number of successful extensions: 12864
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12864
Number of HSP's successfully gapped: 1
Length of query: 4534
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4516
Effective length of database: 8,109,745
Effective search space: 36623608420
Effective search space used: 36623608420
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)