BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11136 (UTR included)
(1762 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042A2B06 105 2e-22
BF01012B1C01 100 1e-20
BF14_729_C3 98 6e-20
BF01058A1C03 90 1e-17
BF14_2249_C1 82 3e-15
BF01049B2H03 80 1e-14
BF01022A1G02 80 1e-14
BF14_729_C2 78 5e-14
BF01058B2C06 74 8e-13
BF01025A1A12 72 3e-12
>BF01042A2B06
Length = 781
Score = 105 bits (53), Expect = 2e-22
Identities = 112/131 (85%), Gaps = 3/131 (2%)
Strand = Plus / Minus
Query: 296 ataatgagatctaacactttcacgagtattcatttaaatgaaactaatattttcggatta 355
||||||||||| || |||||| ||||||||| ||||||| ||| ||||||||||||||||
Sbjct: 374 ataatgagatcaaagactttcgcgagtattcgtttaaattaaagtaatattttcggatta 315
Query: 356 ctacgagtttttttattat---ttttaaaaactgtatactcccgacgtttcggtaacttt 412
||||| ||| ||| ||||| |||| |||||| |||||| |||||||||||| ||||
Sbjct: 314 ctacgcgttatttaattatttatttttaaaactacatactcacgacgtttcggttacttc 255
Query: 413 gcaccaaccgt 423
||| |||||||
Sbjct: 254 gcagcaaccgt 244
>BF01012B1C01
Length = 950
Score = 99.6 bits (50), Expect = 1e-20
Identities = 121/144 (84%), Gaps = 3/144 (2%)
Strand = Plus / Minus
Query: 297 taatgagatctaacactttcacgagtattcatttaaatgaaactaatattttcggattac 356
|||||||| |||||||| || | |||| ||||||||||||||||||||||| ||||||
Sbjct: 794 taatgagaactaacactgtcgccagtagccatttaaatgaaactaatattttacgattac 735
Query: 357 tacgagtttttttattatttttaaaaactgtatactcccgacgtttcggtaactttgcac 416
|||||||| |||||||| ||| |||| | ||||||||||||||||| ||||||||
Sbjct: 734 tacgagttattttattagttt---caactacacactcccgacgtttcggttactttgcag 678
Query: 417 caaccgtgatctcgggcacacgag 440
|| |||||||| ||| || |||||
Sbjct: 677 cagccgtgatcacggacagacgag 654
>BF14_729_C3
Length = 2041
Score = 97.6 bits (49), Expect = 6e-20
Identities = 124/144 (86%), Gaps = 5/144 (3%)
Strand = Plus / Minus
Query: 299 atgagatctaacactttcacgagtattcatttaaatgaaactaatatt-ttcggat-tac 356
||||||||||| | |||| |||||||||||||||||||| ||| |||| ||||||| |||
Sbjct: 1729 atgagatctaagattttcgcgagtattcatttaaatgaagctagtattattcggatatac 1670
Query: 357 tacgagtttttttattatttttaaaaactgtatactcccgacgtttcggtaactttgcac 416
|||| | |||||||| |||||||||| ||| ||||||||||||||| ||||||||
Sbjct: 1669 tacgcg-gattttatta--tttaaaaactacataatcccgacgtttcggttactttgcag 1613
Query: 417 caaccgtgatctcgggcacacgag 440
||||||||||| |||||| |||||
Sbjct: 1612 caaccgtgatcacgggcagacgag 1589
>BF01058A1C03
Length = 779
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 318 cgagtattcatttaaatgaaactaatattttcggattactacgagtttttttattatttt 377
||||||||||||||||||||||||||||||||||||||| | | | | ||||||||||||
Sbjct: 519 cgagtattcatttaaatgaaactaatattttcggattacaaagtgctattttattatttt 460
Query: 378 taaaa 382
|||||
Sbjct: 459 taaaa 455
>BF14_2249_C1
Length = 1315
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 312 ctttcacgagtattcatttaaatgaaactaatattttcggattactacg 360
||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 331 ctttcacaagtattcatttaaatgaaactaatattttcggattgctacg 379
>BF01049B2H03
Length = 832
Score = 79.8 bits (40), Expect = 1e-14
Identities = 59/64 (92%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 296 ataatgagatctaacactttcacgagtattcatttaaatgaaactaata-ttttcggatt 354
|||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 355 ataatgagatctaagattttagcgagtattcatttaaatgaaactaatatttttcggatt 296
Query: 355 acta 358
||||
Sbjct: 295 acta 292
>BF01022A1G02
Length = 638
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 295 gataatgagatctaacactttcacgagtattcatttaaatgaaactaatattttcggatt 354
||||||||||| ||| |||| | |||| |||||||||||||| ||||||||||||||||
Sbjct: 497 gataatgagatttaagacttgcgggagtgttcatttaaatgaagctaatattttcggatt 556
Query: 355 actacgagtttt 366
|||||| |||||
Sbjct: 557 actacgcgtttt 568
>BF14_729_C2
Length = 1289
Score = 77.8 bits (39), Expect = 5e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 367 tttattatttttaaaaactgtatactcccgacgtttcggtaactttgcaccaaccgtgat 426
|||||| || ||||||||| ||||||||||||||||||| ||||| || ||||||||||
Sbjct: 602 tttatttttgttaaaaactacatactcccgacgtttcggttacttttcagcaaccgtgat 543
Query: 427 ctcgggcacacgaga 441
| |||||| ||||||
Sbjct: 542 cacgggcagacgaga 528
>BF01058B2C06
Length = 772
Score = 73.8 bits (37), Expect = 8e-13
Identities = 95/113 (84%), Gaps = 1/113 (0%)
Strand = Plus / Plus
Query: 330 taaatgaaactaatattttcggattactacgagtttttttattatttttaaaaactgtat 389
|||||||||||||||||||| |||||||||| | | |||||| ||| | |||||| ||
Sbjct: 372 taaatgaaactaatattttctgattactacgcg-tgctttattttttgttaaaactacat 430
Query: 390 actcccgacgtttcggtaactttgcaccaaccgtgatctcgggcacacgagat 442
| ||||||||||||||| ||||||| || |||||||| ||| || |||||||
Sbjct: 431 attcccgacgtttcggttactttgctgcagccgtgatcacggccagacgagat 483
>BF01025A1A12
Length = 880
Score = 71.9 bits (36), Expect = 3e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 328 tttaaatgaaactaatattttcggattactacgagtttttttattatttttaaaaactgt 387
|||||||||||||||||||||||||| || || | | ||||||||| ||||||||||
Sbjct: 84 tttaaatgaaactaatattttcggatagcttcgcg-tattttattatgtttaaaaactac 142
Query: 388 atactcccgacgtttc 403
||||||||||||||||
Sbjct: 143 atactcccgacgtttc 158
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 195,433
Number of extensions: 3981
Number of successful extensions: 3981
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 3976
Number of HSP's successfully gapped: 10
Length of query: 1762
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1745
Effective length of database: 8,119,229
Effective search space: 14168054605
Effective search space used: 14168054605
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)