BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11137 (UTR included)
(7408 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051A2F07 605 e-172
>BF01051A2F07
Length = 802
Score = 605 bits (305), Expect = e-172
Identities = 317/321 (98%)
Strand = Plus / Minus
Query: 4073 agtgccatctagcggtccaataaacgtatctgcgaacgcgacgtcatccaccaccgtagt 4132
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 509 agtgccatctagcggtccaataaacgtatctgctaatgcgacgtcatccaccaccgtagt 450
Query: 4133 ggtgctatggggtgatatacccttacaagatcaaaacggtctcatcgagggatacaaggt 4192
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ggtgctgtggggtgatatacccttacaagatcaaaacggtctcatcgagggatacaaggt 390
Query: 4193 gtgctacgccgcggtcgtgccaccgccgcgaccagaacacaagaaagttgaatgccatcc 4252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gtgctacgccgcggtcgtgccaccgccgcgaccagaacacaagaaagttgaatgccatcc 330
Query: 4253 gataccatccaatcagacacacactgtgacgctgacggagctaaggaaatacgtggtgta 4312
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gataccatcaaatcagacacacactgtgacgctgacggagctaaggaaatacgtggtgta 270
Query: 4313 tcaagtgcaagtgttggggtacacgaggctaggagatggcgcgctcagcgaccctccagt 4372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tcaagtgcaagtgttggggtacacgaggctaggagatggcgcgctcagcgaccctccagt 210
Query: 4373 tactgtcagaacctatgaaga 4393
|||||||||||||||||||||
Sbjct: 209 tactgtcagaacctatgaaga 189
Score = 383 bits (193), Expect = e-105
Identities = 199/202 (98%)
Strand = Plus / Minus
Query: 3873 aaccccaaaggttataacatcacatacaaacgcagcggcagtaatgatactctatatagt 3932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 aaccccaaaggttataacatcacatacaaacgcagcggcagtaatgatactctatatagt 743
Query: 3933 attatagacgatcacacggccaactcacacgtattatcaaatctcgaggagtggtccgtg 3992
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 742 attatagacgatcacacggccannncacacgtattatcaaatctcgaggagtggtccgtg 683
Query: 3993 tacgaaattactatgacggctattaatgaagttggcacttctgctgtcagtcctacggcc 4052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tacgaaattactatgacggctattaatgaagttggcacttctgctgtcagtcctacggcc 623
Query: 4053 actgaaagaactagagaagcag 4074
||||||||||||||||||||||
Sbjct: 622 actgaaagaactagagaagcag 601
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 95,196
Number of extensions: 10717
Number of successful extensions: 10717
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10717
Number of HSP's successfully gapped: 2
Length of query: 7408
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 7390
Effective length of database: 8,109,745
Effective search space: 59931015550
Effective search space used: 59931015550
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)