BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11146 (UTR included)
(2314 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2338_C1 2928 0.0
>BF14_2338_C1
Length = 1504
Score = 2928 bits (1477), Expect = 0.0
Identities = 1495/1501 (99%)
Strand = Plus / Plus
Query: 455 aaatatcttggcgtttttattagttatctagtatttacttacataaatgggttcttcgca 514
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 4 aaatatcttggcgtttttattagttatcttgtatttacttacataaatgggttcttcgca 63
Query: 515 aagttctgaagttccaggagggggttcagaggggtatcatatcttaagggtccaggacgg 574
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 64 aagttctgaagttccaggagggggttcagagggatatcatatcttaagggtccaggacgg 123
Query: 575 ctccccggggcaaaaagttaatctcgaaccgttttttgattttatagtagctatagaaaa 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ctccccggggcaaaaagttaatctcgaaccgttttttgattttatagtagctatagaaaa 183
Query: 635 tactagattggatcaagataacgacactcttaaaacgctcttaaaacagaatattgataa 694
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tactagattggatcaagataatgacactcttaaaacgctcttaaaacagaatattgataa 243
Query: 695 gacaataaagatgctcatttacagcacaaaaacccaatcggtaagggaggtgatgataac 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gacaataaagatgctcatttacagcacaaaaacccaatcggtaagggaggtgatgataac 303
Query: 755 acccagtgcgaactggggtggacaaggtttactgggtgttagcattcgtttttgttcctt 814
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 304 acccagtgcgaactggggtggacaaggtttactgggcgttagcattcgtttttgttcctt 363
Query: 815 tgaaggtgcaaatgaaaatgtttggcatgtgttggaagtgcatccttcttcaccagcaga 874
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 364 tgaaggtgcaaatgaaaatgtttggcatgtgttggaagtgcatccttcgtcaccagcaga 423
Query: 875 actggctggtttacgacccttctcagattatataataggagctgattctataatgcatga 934
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 actggctggtttaagacccttctcagattatataataggagctgattctataatgcatga 483
Query: 935 aagtgaagatctgtttacattaattgaagcacatgaaggaagaccattaaagctctatgt 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aagtgaagatctgtttacattaattgaagcacatgaaggaagaccattaaagctctatgt 543
Query: 995 ttataatattaatgatgacacctgtcgtgaagttgtgataactcctaatcatgcctgggg 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ttataatattaatgatgacacctgtcgtgaagttgtgataactcctaatcatgcctgggg 603
Query: 1055 aggtgaaggtagtcttggttgtggtattggctatggctaccttcacaggattcctattag 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 aggtgaaggtagtcttggttgtggtattggctatggctaccttcacaggattcctattag 663
Query: 1115 aaatgcaaacattactcaaaaccaaatacaatataatgtttcaacaccaatggtgtcaga 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 aaatgcaaacattactcaaaaccaaatacaatataatgtttcaacaccaatggtgtcaga 723
Query: 1175 acaaaatatacagcaggctatggtgtcgggggtacaaagcttaagtgtcaacgatgagac 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 acaaaatatacagcaggctatggtgtcgggggtacaaagcttaagtgtcaacgatgagac 783
Query: 1235 ggcaccacttgttgcacagtctcaggtatctcagccacagttcctgtcaggtgtgccaat 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 ggcaccacttgttgcacagtctcaggtatctcagccacagttcctgtcaggtgtgccaat 843
Query: 1295 ggtaaatcctggagcatataacccaggaatccctgtcagtagtgccccaaaagccttaga 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 ggtaaatcctggagcatataacccaggaatccctgtcagtagtgccccaaaagccttaga 903
Query: 1355 agcaactgccataccacaagaaagccaacctccaatgtcacaaccccagtcaatggtctc 1414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 agcaactgccataccacaagaaagccaacctccaatgtcacaaccccagtcaatggtctc 963
Query: 1415 caatatggcggcctattccagcaatttggctgaaacaacattaaccaatttaggtagcat 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 caatatggcggcctattccagcaatttggctgaaacaacattaaccaatttaggtagcat 1023
Query: 1475 tccttccgtgtcaaatatgcaaccaccggctccacttcctaatctgcccggcatcccaat 1534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 tccttccgtgtcaaatatgcaaccaccggctccacttcctaatctgcccggcatcccaat 1083
Query: 1535 gaaccaaccgcagccatatatacctataatgcaaaattactctcagcctcaggcaaccgt 1594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 gaaccaaccgcagccatatatacctataatgcaaaattactctcagcctcaggcaaccgt 1143
Query: 1595 tccgattcaaacgatgcaacaggctccaaacttagttccaacttttgatatgagtagttt 1654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 tccgattcaaacgatgcaacaggctccaaacttagttccaacttttgatatgagtagttt 1203
Query: 1655 tgcaccaattcaagcgccgtctttaggaggactgcccgtagtgacgccagtttctctccc 1714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 tgcaccaattcaagcgccgtctttaggaggactgcccgtagtgacgccagtttctctccc 1263
Query: 1715 aggaatgccatcaataacagttagcgctactttacccgtatcgacgatgcaagaaataca 1774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1264 aggaatgccatcaataacagttagcgctactttacccgtatcgacgatgcaagaaataca 1323
Query: 1775 ccaacagcaggtccaacagcagcaagatttactatcgtaaatattttatagtatttaggt 1834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1324 ccaacagcaggtccaacagcagcaagatttactatcgtaaatattttatagtatttaggt 1383
Query: 1835 tcaaaaattgacatttagcacagattataatttagttgccaatatattttatttcgttta 1894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1384 tcaaaaattgacatttagcacagattataatttagttgccaatatattttatttcgttta 1443
Query: 1895 tccatgttatatttctgtataaatataatttttgttcttgtctattacattcatgtataa 1954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1444 tccatgttatatttctgtataaatataatttttgttcttgtctattacattcatgtataa 1503
Query: 1955 c 1955
|
Sbjct: 1504 c 1504
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 338,045
Number of extensions: 8670
Number of successful extensions: 8670
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8670
Number of HSP's successfully gapped: 1
Length of query: 2314
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2297
Effective length of database: 8,119,229
Effective search space: 18649869013
Effective search space used: 18649869013
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)